Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L22
         (420 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M55284-1|AAA60100.1|  682|Homo sapiens protein kinase C-L protein.     31   2.1  
BC037268-1|AAH37268.1|  683|Homo sapiens protein kinase C, eta p...    31   2.1  
AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein.     30   3.6  
AB037723-1|BAA92540.3| 2016|Homo sapiens KIAA1302 protein protein.     29   8.4  

>M55284-1|AAA60100.1|  682|Homo sapiens protein kinase C-L protein.
          Length = 682

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 361 CHSLHYGSQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSYC 224
           CH L   +  CQ+   K + K+  Q     + HKF  H Y   ++C
Sbjct: 213 CHHLIVTACTCQNNINKVDSKIAEQRFGINIPHKFSIHNYKVPTFC 258


>BC037268-1|AAH37268.1|  683|Homo sapiens protein kinase C, eta
           protein.
          Length = 683

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 361 CHSLHYGSQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSYC 224
           CH L   +  CQ+   K + K+  Q     + HKF  H Y   ++C
Sbjct: 214 CHHLIVTACTCQNNINKVDSKIAEQRFGINIPHKFSIHNYKVPTFC 259


>AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein.
          Length = 2450

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 103  SIRENGMGKLLNCLPNINQQKSGNRLEQELPPLSGNTGKIYNRNLNY 243
            SI  NG  + ++C P+ N Q  GN+L   +    G  G +Y  + NY
Sbjct: 899  SIMGNGRRRSISC-PSCNGQADGNKLLAPVALACGIDGSLYVGDFNY 944


>AB037723-1|BAA92540.3| 2016|Homo sapiens KIAA1302 protein protein.
          Length = 2016

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 103 SIRENGMGKLLNCLPNINQQKSGNRLEQELPPLSGNTGKIYNRNLNY 243
           SI  NG  + ++C P+ N    GN+L   +    G+ G +Y  + NY
Sbjct: 452 SIMGNGRRRSISC-PSCNGLADGNKLLAPVALTCGSDGSLYVGDFNY 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,934,662
Number of Sequences: 237096
Number of extensions: 1185685
Number of successful extensions: 7182
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7182
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)