Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L22
(420 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 26 0.20
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.35
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.35
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 0.61
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 2.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 2.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 2.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 2.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 5.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 5.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 20 9.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 20 9.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 20 9.9
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 25.8 bits (54), Expect = 0.20
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 34 FXNGINSFIWFT*LLIMSAHNYFSIRENG 120
F IN F WF L NY+++ NG
Sbjct: 434 FFLAINVFYWFAYLSRSERINYYNVNSNG 462
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.35
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 160 QKSGNRLEQELPPLSGNTGKIYNRNLNYTYDLQTYALNNEDR 285
++ +R + + LS NT I+N N Y Y+ Y NN ++
Sbjct: 71 ERERSREPKIISSLSNNT--IHNNNYKYNYNNNNYNNNNYNK 110
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 340 SQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSY 227
S++ R R R PK++ + + + + YN+++Y
Sbjct: 66 SRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNY 103
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.35
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 160 QKSGNRLEQELPPLSGNTGKIYNRNLNYTYDLQTYALNNEDR 285
++ +R + + LS NT I+N N Y Y+ Y NN ++
Sbjct: 71 ERERSREPKIISSLSNNT--IHNNNYKYNYNNNNYNNNNYNK 110
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 340 SQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSY 227
S++ R R R PK++ + + + + YN+++Y
Sbjct: 66 SRDRAERERSREPKIISSLSNNTIHNNNYKYNYNNNNY 103
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 0.61
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 301 SDFFSESETDTPDFHSEESDSSAGSALCRNTAEATK 408
SD ES T+ PD + S SSA +++C + K
Sbjct: 578 SDSGIESGTEKPDKPASSSASSAPTSVCSSPRSEDK 613
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 340 SQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSY 227
S++ R R R PK++ + + + + YN+++Y
Sbjct: 67 SRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNY 104
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 340 SQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSY 227
S++ R R R PK++ + + + + YN+++Y
Sbjct: 67 SRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNY 104
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 340 SQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSY 227
S++ R R R PK++ + + + + YN+++Y
Sbjct: 67 SRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNY 104
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -3
Query: 340 SQECQSRFRKRNPKMVYQHDLHYLKHKFVSHTYNSSSY 227
S++ R R R PK++ + + + + YN+++Y
Sbjct: 67 SRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNY 104
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 223 IFFQYSLTTGAILA 182
IFF Y+L GA++A
Sbjct: 287 IFFSYALGLGALVA 300
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 223 IFFQYSLTTGAILA 182
IFF Y+L GA++A
Sbjct: 340 IFFSYALGLGALVA 353
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 7.5
Identities = 12/57 (21%), Positives = 22/57 (38%)
Frame = +1
Query: 112 ENGMGKLLNCLPNINQQKSGNRLEQELPPLSGNTGKIYNRNLNYTYDLQTYALNNED 282
EN K ++ ++ +E +S + K + N NY Y+ NN +
Sbjct: 286 ENSYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNN 342
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +1
Query: 178 LEQELPPLSGNTGKIYNRNLNYTYDLQTYALNNEDRAGT 294
+E E P+ K +NRN+ + L+ + +GT
Sbjct: 697 IEAEPQPIGKALSKCHNRNVTTCNMFRKTNLSGDSSSGT 735
Score = 20.2 bits (40), Expect = 9.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 386 LHNADPALLSLSSLWKSGVSVSLSEKKSENGVPARSSLFK 267
L+ P+ + WK+ V +KKS + P R FK
Sbjct: 408 LYYLKPSYDAQEPAWKTHVWKKGRDKKSTSKKPRRKFHFK 447
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.2 bits (40), Expect = 9.9
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +1
Query: 112 ENGMGKLLNCLPNINQQKSGNRLEQELPPLSGNTGKIYNRNLNYTYDLQTYALNN 276
EN K ++ ++ +E +S + K + N NY Y+ NN
Sbjct: 53 ENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.2 bits (40), Expect = 9.9
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +1
Query: 112 ENGMGKLLNCLPNINQQKSGNRLEQELPPLSGNTGKIYNRNLNYTYDLQTYALNN 276
EN K ++ ++ +E +S + K + N NY Y+ NN
Sbjct: 53 ENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.2 bits (40), Expect = 9.9
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +1
Query: 112 ENGMGKLLNCLPNINQQKSGNRLEQELPPLSGNTGKIYNRNLNYTYDLQTYALNN 276
EN K ++ ++ +E +S + K + N NY Y+ NN
Sbjct: 53 ENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNN 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,130
Number of Sequences: 438
Number of extensions: 2631
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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