Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L21
         (465 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060845-1|AAH60845.1|  755|Homo sapiens l(3)mbt-like 3 (Drosoph...    29   6.0  
AL583846-1|CAH73677.1|  780|Homo sapiens RP11-73O6.1 protein.          29   6.0  
AL355581-1|CAI95325.1|  780|Homo sapiens RP11-73O6.1 protein.          29   6.0  
AB058701-1|BAB47427.1|  781|Homo sapiens KIAA1798 protein protein.     29   6.0  

>BC060845-1|AAH60845.1|  755|Homo sapiens l(3)mbt-like 3
           (Drosophila) protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 380 ITSTLNSIFLLEFD---ESFSRFCFSSHPILQSVPWC 279
           +T  +++ FL+ FD   ES+  +C +S P +  V WC
Sbjct: 368 VTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPVGWC 404


>AL583846-1|CAH73677.1|  780|Homo sapiens RP11-73O6.1 protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 380 ITSTLNSIFLLEFD---ESFSRFCFSSHPILQSVPWC 279
           +T  +++ FL+ FD   ES+  +C +S P +  V WC
Sbjct: 393 VTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPVGWC 429


>AL355581-1|CAI95325.1|  780|Homo sapiens RP11-73O6.1 protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 380 ITSTLNSIFLLEFD---ESFSRFCFSSHPILQSVPWC 279
           +T  +++ FL+ FD   ES+  +C +S P +  V WC
Sbjct: 393 VTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPVGWC 429


>AB058701-1|BAB47427.1|  781|Homo sapiens KIAA1798 protein protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 380 ITSTLNSIFLLEFD---ESFSRFCFSSHPILQSVPWC 279
           +T  +++ FL+ FD   ES+  +C +S P +  V WC
Sbjct: 394 VTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPVGWC 430


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,752,682
Number of Sequences: 237096
Number of extensions: 1071020
Number of successful extensions: 5457
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5457
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)