Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L21
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   2.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   4.9  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 246 FSIKFEPWEKYAPRNGL*NWM 308
           F +  + W K  P+N + NW+
Sbjct: 336 FKVIIDNWIKGTPQNNVPNWV 356


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 413  VLVSPKYNIMYITSTLNSIFLLEF 342
            V V P   ++Y+TS+ +S  LL +
Sbjct: 1401 VQVPPSAPVLYVTSSTSSSILLHW 1424


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 413  VLVSPKYNIMYITSTLNSIFLLEF 342
            V V P   ++Y+TS+ +S  LL +
Sbjct: 1397 VQVPPSAPVLYVTSSTSSSILLHW 1420


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 240 SYFSIKFEPWEKYAPRNGL*NWM 308
           S F    + W  Y P +G+ NW+
Sbjct: 321 SDFKKLIDNWMTYMPPSGIPNWV 343


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 240 SYFSIKFEPWEKYAPRNGL*NWM 308
           S F    + W  Y P +G+ NW+
Sbjct: 321 SDFKKLVDNWMTYMPPSGIPNWV 343


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 204 GFIGNI*LCIV 172
           GF+GNI  CIV
Sbjct: 47  GFVGNIITCIV 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,463
Number of Sequences: 438
Number of extensions: 2442
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)