Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L20
(515 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 33 0.019
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 33 0.025
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.077
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 30 0.18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 29 0.41
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 29 0.41
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 29 0.41
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 28 0.72
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 28 0.72
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 1.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 1.7
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 1.7
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 27 2.2
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 26 2.9
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 26 2.9
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 2.9
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 25 5.1
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 25 5.1
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 25 5.1
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.7
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 25 6.7
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 25 6.7
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 25 6.7
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 25 6.7
SPBC19C7.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.9
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 8.9
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 8.9
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 33.5 bits (73), Expect = 0.019
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Frame = +2
Query: 173 PNQPNQHQRDRSQSF---GPMRSGYVQHQQNQNNR--SGYGNQRRYNEQDSYGNQERYGN 337
P + N + + S+ G + Y + N NN S YG+ Y S N YG
Sbjct: 19 PEESNSNTATNAPSYSVGGTTANSYSSNSYNDNNNSNSTYGSSNNYGNYGSSNNYGSYGA 78
Query: 338 QEKY---GNQERYGNQRYSTQN 394
Y G+ YGN + N
Sbjct: 79 SNTYGSNGSSNNYGNYGATNSN 100
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = +2
Query: 254 NQNNRSGYGNQRRYNE---QDSYGNQERYGNQEKYGNQERYGNQRYS 385
+ NN YG+ Y ++YG+ N YG G+ YS
Sbjct: 60 SSNNYGNYGSSNNYGSYGASNTYGSNGSSNNYGNYGATNSNGDAGYS 106
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 33.1 bits (72), Expect = 0.025
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +2
Query: 152 SYSTVPPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERY 331
+Y+ N QHQ+ S S + S ++ N+ SG N++ YN N + Y
Sbjct: 573 NYNNNNSGNNNQQHQQS-SSSLQGLASSFL------NSSSGNSNKQNYNN----NNNQNY 621
Query: 332 GNQEKYGNQERYGNQRYSTQNYHHQQNSG 418
GN N + Y N S+Q + Q SG
Sbjct: 622 GN----NNNQNYNNNNNSSQGGNSQGGSG 646
Score = 30.7 bits (66), Expect = 0.14
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = +2
Query: 260 NNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQQNSGYRSHN 433
NN SG NQ+ S GN + + QNY + N Y ++N
Sbjct: 576 NNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNNQNYNNNN 633
Score = 29.9 bits (64), Expect = 0.24
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = +2
Query: 185 NQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGN--QERYGNQEKYGNQ 358
N+ + S M S ++ N NN + N YN +S N Q + + G
Sbjct: 539 NESMVSKLSSLSGMASSFLGSSGNNNNNNN-SNSGNYNNNNSGNNNQQHQQSSSSLQGLA 597
Query: 359 ERYGNQ---RYSTQNYHHQQNSGYRSHN 433
+ N + QNY++ N Y ++N
Sbjct: 598 SSFLNSSSGNSNKQNYNNNNNQNYGNNN 625
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.5 bits (68), Expect = 0.077
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 248 QQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQQNSGYRS 427
Q + +N + S N++ +GN + + +RYGN S Y H Q+ G+
Sbjct: 268 QVSASNSPALSGSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKYSHYQH-GFNY 326
Query: 428 HN 433
+N
Sbjct: 327 NN 328
Score = 27.9 bits (59), Expect = 0.95
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Frame = +2
Query: 158 STVPPPNQPNQHQRDRSQSFG----PMRSGYVQHQQNQNNRSG------YGNQR-RYNEQ 304
+T P Q Q S + P + ++QN N S YGN YN+
Sbjct: 258 NTTDPATQTTQVSASNSPALSGSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKY 317
Query: 305 DSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQ 406
Y + Y N N+ + R S +NY++Q
Sbjct: 318 SHYQHGFNYNNSGNNRNESGHPRFRNSRRNYNNQ 351
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 245 HQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQQNSG 418
+ + NNR+ G+ R N + +Y NQ Y Y + R NQ S +N N+G
Sbjct: 326 YNNSGNNRNESGHPRFRNSRRNYNNQGAY---PTYMSNGRSANQ--SPRNNPQNVNNG 378
Score = 24.6 bits (51), Expect = 8.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 206 SQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYS 385
S S P SG N ++RS N ++E+ Y +RYGN N+ + ++
Sbjct: 270 SASNSPALSGS-STPSNTSSRSNRQNHGNFSEKRHY---DRYGNSHPSYNKYSHYQHGFN 325
Query: 386 TQNYHHQQN-SGY 421
N + +N SG+
Sbjct: 326 YNNSGNNRNESGH 338
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 30.3 bits (65), Expect = 0.18
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 188 QHQRDRSQS---FGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQ 358
Q RD QS P G ++ +N N+ ++ NE+ SY Q N E+ +
Sbjct: 72 QQARDGRQSPSKEAPFGEGELK-LENFENQENEADEAE-NEETSYSEQNHTENTEEIAEE 129
Query: 359 ERYGNQRYSTQNYHHQQNSGY 421
R + +S N+H ++G+
Sbjct: 130 SRPLERTHSGSNHHEASSTGH 150
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.1 bits (62), Expect = 0.41
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQER 364
+ R RS S R Y + + +RS Y + R+ ++ ++ +Q + N ER
Sbjct: 332 SNRDRKRSSSRSDDRE-YHRRSDGRYDRSNYRDDYRHRRKE----RDHRDDQSSFRN-ER 385
Query: 365 YGNQRYSTQNYHHQQNSGYRS 427
+ N ++YH ++N+G ++
Sbjct: 386 FSNYYGDDRSYHKRRNTGNKN 406
Score = 27.9 bits (59), Expect = 0.95
Identities = 22/115 (19%), Positives = 44/115 (38%)
Frame = +2
Query: 80 RSHTVASLETAGHRMLGHHLPRDRSYSTVPPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQ 259
R H S A +R ++ RDR S+ ++ + D R Y ++ +
Sbjct: 314 RIHVDFSQSVARYRQY-YNSNRDRKRSSSRSDDREYHRRSDGRYDRSNYRDDYRHRRKER 372
Query: 260 NNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQQNSGYR 424
++R + R + YG+ Y + GN+ + R + ++ + YR
Sbjct: 373 DHRDDQSSFRNERFSNYYGDDRSYHKRRNTGNKNCDDHLRDKSPERRYRYDRRYR 427
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 29.1 bits (62), Expect = 0.41
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 269 SGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGN 373
S YG +R YN YG E N + G + Y N
Sbjct: 69 SNYGGRREYNRGGHYGGGEGRQNNYRGGREGGYSN 103
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 29.1 bits (62), Expect = 0.41
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 113 GHRMLGHHLPRDRSYSTVPPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQNNRSGY 277
GH G R YS PP N + +R + +G R Y N NNR+GY
Sbjct: 944 GHEGYGGR-SRGGGYSNGPPAG--NHYSSNRGKGYGYQRESY-----NNNNRNGY 990
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 284 QRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQQNSGY 421
+R ++ + + GN R G+Q YG + Y +Q YS++ + +G+
Sbjct: 873 ERSFSSRRNNGNSYRGGHQS-YGVRRSYQSQSYSSRQSYTGVTNGF 917
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 260 NNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYSTQNYHHQQNSGY 421
N+R G+ + Y N GN + YG QR ++Y++ +GY
Sbjct: 940 NSRGGHEGYGGRSRGGGYSNGPPAGNHYSSNRGKGYGYQR---ESYNNNNRNGY 990
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 28.3 bits (60), Expect = 0.72
Identities = 20/98 (20%), Positives = 38/98 (38%)
Frame = +2
Query: 140 PRDRSYSTVPPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGN 319
P ++ + + + + HQ S+ R+ Y + S N+RRY Q
Sbjct: 163 PHEKHFRPLRQRSSVDDHQEFESEDDKYRRNSYSSWSGSNFESSNGSNRRRYRTQMEEPL 222
Query: 320 QERYGNQEKYGNQERYGNQRYSTQNYHHQQNSGYRSHN 433
+ N ++GN R + + Y H + Y +H+
Sbjct: 223 SSKRRN--RFGNGSR---RDVDSSKYSHDSDYSYGAHS 255
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 28.3 bits (60), Expect = 0.72
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = +2
Query: 206 SQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGNQRYS 385
S+ F P + V QNQ ++ +++Y D++G+ + + + +K N +
Sbjct: 252 SKQFNPETNESVGILQNQESKRNEQIKQQYMPADNFGSNDNHSHNKKRRLSSLSTNNNHL 311
Query: 386 TQNYHHQQN 412
N H N
Sbjct: 312 CDNCHKPVN 320
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 186 TNTNVIDRSRSDPCVVVTSNTNRIRITDL 272
T T +ID D ++VT+N +RIRI +L
Sbjct: 449 TRTQMIDNIAGDTEMLVTTNDSRIRIYNL 477
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 167 PPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEK 346
PPP P SQ P GYV+ ++N+ +++ NE+ + R + K
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSGNLEKQLNER---ARKWRASQKSK 65
Query: 347 YGNQERYG 370
+G + + G
Sbjct: 66 FGVKRKQG 73
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 161 TVPPPNQPNQHQRDRSQSFGPMRSGYVQH--QQNQNNRSGYGNQRRYNEQDSYGNQERYG 334
T PP + ++ R QSF SGY + ++R+ ++R Y+ + YG++
Sbjct: 74 TPPPVSMGYRYARSSKQSFQREDSGYNDDVVTNSSSHRTPRHHRRSYSPRSDYGSRSPSP 133
Query: 335 NQEKYGNQER 364
+ +Q R
Sbjct: 134 HSSVDSHQSR 143
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 94 SEPGDSRAQDARSPPASGQEL 156
S+P S AQ+ RSPPAS + L
Sbjct: 157 SDPSPSTAQNHRSPPASCKRL 177
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 26.2 bits (55), Expect = 2.9
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +2
Query: 167 PPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEK 346
PP + + R QS PM GY Q Q Q N Q + + +YG R G+ +
Sbjct: 314 PPTHLESGSSAFRLQS-SPM--GY-QMPQFQGNMRPNMQQSQMFDPSAYGMSRRPGSPRQ 369
Query: 347 YGNQERYGNQRYSTQNYHHQQNSGYRSH 430
+ Q+R +Q + Q G H
Sbjct: 370 FDQQQRLYSQPNAMMYQTQQGRQGNPMH 397
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +2
Query: 185 NQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQER 364
N +R R P S ++ +N +N + + + N + S+G+ +RY ++K E
Sbjct: 6 NMGKRKRFLEATPYESKVLEQPKNSSNTNEESSSQD-NMKASFGSSKRYDERQKKKRSEY 64
Query: 365 YGNQRYSTQN 394
+R + +N
Sbjct: 65 RRLRRINQRN 74
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 230 SGYVQH--QQNQNNRSGYGNQRRYNEQDSYGNQERYGNQEKYGNQERYGN 373
+GY + QQ QN + Y NQ+ YN Y NQ+ ++ Q + G+
Sbjct: 657 TGYYKQPMQQQQNMQQPYYNQQNYN----YQNQQPMQGMQQQSMQPQVGS 702
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 102 WRQPGTGCSVTTCLGTGATRPCLRQTSPTNTNVIDRSRSDPCVVVTSNTN-RI-RITDLV 275
WR+ G T L +G P + S + + S+P V + T+ R+ +T+L
Sbjct: 195 WRRNGFRSKTTPNLNSGKETPSSYKASARLMEQLGLNHSEPSVDFNNQTSYRLPNLTNLS 254
Query: 276 TAIRD 290
+ IRD
Sbjct: 255 SLIRD 259
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 25.4 bits (53), Expect = 5.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 147 TGATRPCLRQTSPTNTNVIDRSRSDPCVVVT-SNTNRIRITDLVTAIRDVITNRT 308
T ++P T P NTN S ++ + SNTN + ITD + ++I T
Sbjct: 100 TSISKPSQTAT-PQNTNTTQVSLTNGTTTNSYSNTNSLPITDTINGTTELIIPTT 153
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 25.4 bits (53), Expect = 5.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 50 RNWRPQIGMVRSHTVA 97
RNWRP +G V + T+A
Sbjct: 369 RNWRPYVGHVDNATIA 384
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 140 PRDRSYSTVPPPNQPNQHQRDRSQSFGPMRSG 235
P +Y+T PP Q +Q S+ P SG
Sbjct: 98 PPSSNYNTAKPPYQTSQFYARPQSSYAPPPSG 129
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 76 GPVPHGSEPGDSRAQDARSPPASGQELLDRASAKPAQ 186
GP+ EP +S P + E L R SA P Q
Sbjct: 542 GPLKKAKEPEESSITPTTPPSFNVGESLSRRSASPLQ 578
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 380 IVDYRTFLGSRIFLGSRIFLDYHNC 306
IVD L FL F+DYH+C
Sbjct: 612 IVDLLVLLRMHKFLSVYSFMDYHSC 636
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 165 CLRQTSPTNTNVIDRSRSD--PCVVVTSNTNRIRITDLVTAIRDVITNRTVM 314
CLR+ + T+ +++ C+V T + R+R DLV I + RT++
Sbjct: 313 CLRKLANTHPSLVSAQLDIILKCLVDTDTSIRLRALDLVNEIVNKENIRTIV 364
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 140 PRDRSYSTVPPPNQPNQHQRDRSQSFGPMRSGYVQHQQNQNNRSGYG 280
P D S VP P+Q Q + F S Q N R GYG
Sbjct: 158 PLDASTPAVPYYGAPDQQQMGQRPEFAQNVSQGFAGQAPYNVRPGYG 204
>SPBC19C7.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 124
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 38 HEENRNWRPQIGMVRSHTVASLETAGHRMLGHHLPRDRS 154
H E +RP R + AS+E+ + L HL + S
Sbjct: 81 HREQNQYRPTADSFRPLSFASMESKLTQRLSRHLSKTSS 119
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 146 DRSYSTVPPPNQPNQHQRDRSQ 211
+ Y TV P N+P+ H R Q
Sbjct: 251 EAKYPTVSPTNEPSAHSRPSPQ 272
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 11 RVLKPGNLSHEENRN 55
R LKPGN+ +ENRN
Sbjct: 771 RDLKPGNIFLDENRN 785
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,230,780
Number of Sequences: 5004
Number of extensions: 47946
Number of successful extensions: 206
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -