Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L19
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0140 + 12255418-12255512,12257514-12257793 112 5e-26
08_02_1181 - 24985963-24986242,24987109-24987197 111 1e-25
02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649 97 3e-21
03_01_0383 + 2980693-2980816,2980908-2981226,2981315-2981624 33 0.060
02_05_0412 + 28768255-28768290,28769436-28769529,28769650-28771226 32 0.11
11_06_0545 + 24839536-24843421,24843871-24844310 30 0.43
03_02_0925 - 12440917-12441560,12441675-12441810 28 1.7
03_01_0366 - 2848449-2849032,2849155-2849233,2849346-2849608,284... 27 2.3
05_05_0215 - 23352363-23352666,23353183-23353495,23353590-23353713 27 3.0
04_04_1021 + 30190403-30190450,30191245-30192924 27 3.0
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 27 4.0
08_02_0201 + 14200684-14201412 27 4.0
07_03_1072 - 23755657-23755662,23755964-23756137,23757144-237573... 27 4.0
04_04_1022 + 30195703-30195753,30195925-30195987,30197535-301978... 27 4.0
03_05_0024 - 19934529-19935298,19935359-19935871,19936147-199366... 27 4.0
01_06_1175 + 35138871-35139009,35139117-35139429,35139791-35140094 27 4.0
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 26 5.2
01_01_1194 + 9525196-9525900 26 5.2
12_01_0891 - 8629832-8629999,8630158-8630346,8630664-8630972,863... 26 6.9
11_06_0721 - 26644625-26644980,26645050-26645152 26 6.9
06_01_1068 + 8715714-8716799,8716899-8717159 26 6.9
05_02_0033 + 5847754-5847982,5848308-5848437,5849038-5849116,584... 26 6.9
01_06_0668 + 31058497-31059510,31059609-31059676,31060189-310602... 26 6.9
06_03_1413 + 30004364-30004517,30004603-30005240 25 9.2
02_02_0723 - 13341390-13342025 25 9.2
01_04_0134 - 16481035-16481150,16481678-16481746,16482184-164825... 25 9.2
01_01_0633 - 4767914-4768020,4768057-4768085,4768590-4768745,476... 25 9.2
01_01_0521 - 3826257-3826616,3826758-3826918,3826992-3827049,382... 25 9.2
>06_02_0140 + 12255418-12255512,12257514-12257793
Length = 124
Score = 112 bits (270), Expect = 5e-26
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = +3
Query: 81 KERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 260
K+R + +EVVTREYT+NLHKRLHG FKK+AP AIKEIR+FA+K MGT DVRVD +L
Sbjct: 5 KQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRVDVKL 64
Query: 261 NKYLWSKGVRNVPFRV 308
NK++WS G+R+VP RV
Sbjct: 65 NKHIWSSGIRSVPRRV 80
>08_02_1181 - 24985963-24986242,24987109-24987197
Length = 122
Score = 111 bits (266), Expect = 1e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +3
Query: 81 KERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 260
+++G + EVVTREYT+NLHKRLH FKK+AP AIKEIR+FA+K MGT DVRVD +L
Sbjct: 3 EKKGGAARKEEVVTREYTINLHKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDVKL 62
Query: 261 NKYLWSKGVRNVPFRV 308
NK++WS G+R+VP RV
Sbjct: 63 NKHIWSSGIRSVPRRV 78
>02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649
Length = 139
Score = 96.7 bits (230), Expect = 3e-21
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 16/92 (17%)
Frame = +3
Query: 81 KERGKESAINEVVTREYTVNLHKRLHGV----------------GFKKRAPRAIKEIRRF 212
K+RG + +EVVTREYT+NLHKRLHG FKK+AP AIKEIR+F
Sbjct: 4 KKRGAGTRKDEVVTREYTINLHKRLHGCIVCSNDLIHYAPDIVSTFKKKAPNAIKEIRKF 63
Query: 213 AEKQMGTPDVRVDTRLNKYLWSKGVRNVPFRV 308
A+K MGT D+R+D +LNK +W+ G+R+VP RV
Sbjct: 64 AQKAMGTTDIRIDVKLNKAIWTNGIRSVPRRV 95
>03_01_0383 + 2980693-2980816,2980908-2981226,2981315-2981624
Length = 250
Score = 32.7 bits (71), Expect = 0.060
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 29 TRAAEFGRAKFYDTWQTQGERKGICHK*SRYS*IYGKFTQTTSRCWFQE--ACTPCYQ 196
T AA G A FY G G C + YS YG T S F + AC CYQ
Sbjct: 21 TAAALSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQ 78
>02_05_0412 + 28768255-28768290,28769436-28769529,28769650-28771226
Length = 568
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 308 NTEWNIPDSF*PKIFV*AGIYSYVWSTHLFFSESPDLLDSTGCTLLETNTV 156
N W +P F A ++ Y+ FF E+PD + ST CT L T+
Sbjct: 454 NIAWQMPQYF---FLAGAEVFCYIAQLEFFFGEAPDTMKST-CTSLALLTI 500
>11_06_0545 + 24839536-24843421,24843871-24844310
Length = 1441
Score = 29.9 bits (64), Expect = 0.43
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 12 AASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRA 191
AAS ++D++ P ER KE+A++ HKR G KK A +
Sbjct: 275 AASSPSQDHHDADKKKPVAAADPSERAKEAAVDP----SGKAKEHKRWITQGEKKAADTS 330
Query: 192 I-KEIRRFAEKQMGTPDV 242
E+ AEK+M DV
Sbjct: 331 TSSEVHDSAEKRMPLADV 348
>03_02_0925 - 12440917-12441560,12441675-12441810
Length = 259
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +2
Query: 47 GRAKFYDTWQTQGERKGICHK*SRYS*IYGKFTQTTSRCWFQE--ACTPCYQ 196
G A FY G G C + YS YG T S F +C CY+
Sbjct: 31 GHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYE 82
>03_01_0366 -
2848449-2849032,2849155-2849233,2849346-2849608,
2849742-2849862
Length = 348
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 81 KERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQM 227
+E+GK+ E +E TV L RLH G R R I +I+ E M
Sbjct: 113 EEKGKKQPPEEKKPKEETVLLRIRLHCDGCADRIRRRIYKIKGVKEVVM 161
>05_05_0215 - 23352363-23352666,23353183-23353495,23353590-23353713
Length = 246
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 53 AKFYDTWQTQGERKGICHK*SRYS*IYGKFTQTTSRCWFQE--ACTPCYQ 196
A FY G G C + YS YG T S F + AC CY+
Sbjct: 29 ATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYE 78
>04_04_1021 + 30190403-30190450,30191245-30192924
Length = 575
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 275 PKIFV*AG--IYSYVWSTHLFFSESPDLLDSTGCTLLETNTV 156
P+ F+ AG ++ Y+ F+SE+P+ + S CT L TV
Sbjct: 467 PQYFMLAGGEVFCYIAQLEFFYSEAPESMKSI-CTSLALLTV 507
>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 86 ERKGICHK*SRYS*IYGKFTQTTSRCWFQEACTPCYQGDPEIR*KTNGYSRRKSRYPPKQ 265
E KG+ RY+ + K ++ R + + T Q D + R T+G RR S PP++
Sbjct: 999 EAKGLLRSDPRYNKLASKDRESIWRRYADDMKTKLKQSDMKERSDTDGKQRRSSD-PPRR 1057
>08_02_0201 + 14200684-14201412
Length = 242
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 24 YGPGLQNSDERNSTTHGKPKERGKESAIN----EVVTREYTVNLHKRLHGVGFKKRAPRA 191
+GPGLQ + E + P + + + +V RE TVN+H L G + A
Sbjct: 171 FGPGLQGALEESEEAGNVPLDVYVSAPVTLRLGDVDLREVTVNVHCALVVDGLSPKKKPA 230
Query: 192 IK 197
IK
Sbjct: 231 IK 232
>07_03_1072 -
23755657-23755662,23755964-23756137,23757144-23757380,
23758109-23758215,23758304-23758841
Length = 353
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 18 SKYGPGLQNSDERNSTTHGKPK 83
++Y P N +ERNS+ HG+ K
Sbjct: 316 AQYEPVRSNLEERNSSAHGRKK 337
>04_04_1022 +
30195703-30195753,30195925-30195987,30197535-30197843,
30197934-30199292
Length = 593
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 275 PKIFV*AG--IYSYVWSTHLFFSESPDLLDSTGCTLLETNTV 156
P+ F AG ++ Y+ F+SE+P+ + S CT L TV
Sbjct: 485 PQYFALAGAEVFCYIAQLEFFYSEAPESMKSM-CTSLALLTV 525
>03_05_0024 -
19934529-19935298,19935359-19935871,19936147-19936635,
19936738-19937044,19937104-19937130
Length = 701
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 81 KERGKESAI-NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTR 257
K+R K S I N+V+ +T + L F ++ PR +K++ + A + D
Sbjct: 282 KQRNKISGITNDVIIAAFTKGVRHELLVGKFGRKPPRTVKQMFKKANDY-----AKADDA 336
Query: 258 LNKYLWSKG 284
+N Y S G
Sbjct: 337 VNAYKQSSG 345
>01_06_1175 + 35138871-35139009,35139117-35139429,35139791-35140094
Length = 251
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 53 AKFYDTWQTQGERKGICHK*SRYS*IYGKFTQTTSRCWFQE--ACTPCYQ 196
A FY G G C + YS YG T S F + AC CY+
Sbjct: 34 ATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYE 83
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 153 LHGVGFKKRAPRAIKEIRRFAEKQMG--TPD-VRVDTRLNKYLWSKG 284
+ GV K R R I+E+ R + G T D V VDT L +++W +G
Sbjct: 69 IEGVSHKIR--RQIEELERAGGVESGALTVDGVPVDTYLTRFVWDEG 113
>01_01_1194 + 9525196-9525900
Length = 234
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 47 GRAKFYDTWQTQGERKGICHK*SRYS*IYGKFTQTTSRCWFQ--EACTPCYQ 196
G A FY G G C + YS YG T S F ++C C++
Sbjct: 16 GSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFE 67
>12_01_0891 -
8629832-8629999,8630158-8630346,8630664-8630972,
8631023-8631229
Length = 290
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 137 YRIFTSNDFIYGRFLSSLLGFAMCRRISL 51
+R F + + LS+LLGF CR+I L
Sbjct: 78 FRFFREEFTLTWKGLSTLLGFHNCRKIDL 106
>11_06_0721 - 26644625-26644980,26645050-26645152
Length = 152
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 30 PGLQNSDERNSTTHGKPKERGKESAINEVVTREY 131
P NS+ S T G+ KE GKE E E+
Sbjct: 46 PPPSNSEASGSGTSGRNKEEGKEGLKQEDANLEF 79
>06_01_1068 + 8715714-8716799,8716899-8717159
Length = 448
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 49 SEFCSPGPYLDAATA 5
SEFCSP P DAA A
Sbjct: 158 SEFCSPPPLEDAAAA 172
>05_02_0033 +
5847754-5847982,5848308-5848437,5849038-5849116,
5849194-5849251,5849732-5850795,5850899-5851003,
5851369-5851473
Length = 589
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 257 AGIYSYVWSTHLFFSESPDLLDSTGCTLLETNTVKSF 147
A I SY +H F + + + +S C +L NT+ SF
Sbjct: 408 AAILSYKVLSHKFVNLATEAANSEECCILIENTLDSF 444
>01_06_0668 +
31058497-31059510,31059609-31059676,31060189-31060270,
31060339-31060431,31060516-31060668,31060900-31060968,
31061091-31061184,31061594-31061677,31062133-31062221,
31062340-31062456,31062567-31062707,31062823-31063005
Length = 728
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 135 VNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPD 239
+N+ ++G GF A + E+ + A KQ+ PD
Sbjct: 441 LNVDSAVYGAGFYASATPQLDELLKEASKQVQNPD 475
>06_03_1413 + 30004364-30004517,30004603-30005240
Length = 263
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +2
Query: 47 GRAKFYDTWQTQGERKGICHK*SRYS*IYGKFTQTTSRCWFQE--ACTPCY 193
G A FY G G C + Y+ YG T S F + +C CY
Sbjct: 37 GTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCY 87
>02_02_0723 - 13341390-13342025
Length = 211
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3
Query: 129 IHE*RLHLWQIPFL 88
I+E R+HLW +P+L
Sbjct: 34 IYESRMHLWDLPYL 47
>01_04_0134 -
16481035-16481150,16481678-16481746,16482184-16482503,
16482566-16482588
Length = 175
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 122 SNDFIYGRFLSSLLGFAMCRRISLVRILQPGS 27
S FI R + S+LGF ++ V + PGS
Sbjct: 93 SGQFIEWRSVQSVLGFDFANKVGCVLLNVPGS 124
>01_01_0633 -
4767914-4768020,4768057-4768085,4768590-4768745,
4768835-4768983,4769106-4769638,4769900-4770068,
4770255-4770347,4770641-4770698,4771392-4771471,
4771548-4771715,4772090-4772242,4772756-4772884,
4772996-4773085,4773990-4774129,4774683-4774814,
4774916-4775087
Length = 785
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 15 ASKYGPGLQNSDERNSTTHGKPKERGK 95
+S Y P + RNS +H K K R K
Sbjct: 716 SSSYSPSPRKRKRRNSVSHRKRKSRRK 742
>01_01_0521 -
3826257-3826616,3826758-3826918,3826992-3827049,
3827426-3827497,3827582-3827639,3828231-3828347,
3828630-3828782,3829182-3829346,3829814-3830132,
3830276-3830780
Length = 655
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 149 TTSRCWFQEACTPCYQGDPEIR 214
T+ RC F++ CT + GD E+R
Sbjct: 67 TSGRCMFEDGCTFAH-GDEELR 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,873,255
Number of Sequences: 37544
Number of extensions: 194775
Number of successful extensions: 495
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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