Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L19
         (308 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31 pro...   136   9e-33
X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for ...   136   9e-33
BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31 p...   136   9e-33
BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.       136   9e-33
BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31 p...   136   9e-33
AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.             136   9e-33
AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31 p...   136   9e-33
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f...    31   0.91 
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g...    31   0.91 
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d...    31   0.91 
AC000064-1|AAB46346.1|  541|Homo sapiens WUGSC:H_RG083M05.1 prot...    31   0.91 
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.           31   0.91 
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.           31   0.91 
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.      31   0.91 
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.                 31   0.91 
AF401656-1|AAK94066.1| 1462|Homo sapiens MAGI-1C beta protein.         28   4.8  
AF401655-1|AAK94065.1| 1160|Homo sapiens MAGI-1A protein.              28   4.8  
AF401654-1|AAK94064.1| 1287|Homo sapiens MAGI-1B alpha beta prot...    28   4.8  
AB010894-1|BAA32002.1| 1256|Homo sapiens BAI1-associated protein...    28   4.8  
U13680-1|AAA21348.1|  332|Homo sapiens lactate dehydrogenase-C p...    27   8.5  
BC090043-1|AAH90043.1|  332|Homo sapiens lactate dehydrogenase C...    27   8.5  
BC064388-1|AAH64388.1|  332|Homo sapiens lactate dehydrogenase C...    27   8.5  
BC056871-1|AAH56871.1|  933|Homo sapiens phospholipase D2 protein.     27   8.5  
BC019249-1|AAH19249.3|  332|Homo sapiens lactate dehydrogenase C...    27   8.5  
AF038441-1|AAB96656.1|  922|Homo sapiens phospholipase D2 protein.     27   8.5  
AF038440-1|AAB96655.1|  933|Homo sapiens phospholipase D2 protein.     27   8.5  
AF035483-1|AAC24498.1|  933|Homo sapiens phospholipase D2 protein.     27   8.5  

>X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31
           protein.
          Length = 121

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 3   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 61

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 62  TRLNKAVWAKGIRNVPYRI 80


>X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for
           ribosomal protein L31. ).
          Length = 125

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 7   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 65

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 66  TRLNKAVWAKGIRNVPYRI 84


>BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 7   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 65

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 66  TRLNKAVWAKGIRNVPYRI 84


>BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.
          Length = 121

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 7   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 65

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 66  TRLNKAVWAKGIRNVPYRI 84


>BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 7   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 65

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 66  TRLNKAVWAKGIRNVPYRI 84


>AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.
          Length = 125

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 7   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 65

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 66  TRLNKAVWAKGIRNVPYRI 84


>AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  136 bits (330), Expect = 9e-33
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = +3

Query: 72  GKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVD 251
           G  K++G+ SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+D
Sbjct: 7   GGEKKKGR-SAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 65

Query: 252 TRLNKYLWSKGVRNVPFRV 308
           TRLNK +W+KG+RNVP+R+
Sbjct: 66  TRLNKAVWAKGIRNVPYRI 84


>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis
           factor 1 protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811


>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene
           1 protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811


>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
           disorder protein 1 protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811


>AC000064-1|AAB46346.1|  541|Homo sapiens WUGSC:H_RG083M05.1
           protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 89  DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 117


>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811


>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811


>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
          Length = 1226

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 726 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 754


>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 151 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 240
           DFTVLV R++H  LSR+S  S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811


>AF401656-1|AAK94066.1| 1462|Homo sapiens MAGI-1C beta protein.
          Length = 1462

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 6    AVAASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTRE---YTVNLHKRLHGVGFKK 176
            A   + + P  Q + E  +TT  KPK+  +        T+E   YTV L +   G GF  
Sbjct: 1080 ATITTTHTPSQQGTQETRNTT--KPKQESQFEFKAPQATQEQDFYTVELERGAKGFGFSL 1137

Query: 177  RAPR 188
            R  R
Sbjct: 1138 RGGR 1141


>AF401655-1|AAK94065.1| 1160|Homo sapiens MAGI-1A protein.
          Length = 1160

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 6    AVAASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTRE---YTVNLHKRLHGVGFKK 176
            A   + + P  Q + E  +TT  KPK+  +        T+E   YTV L +   G GF  
Sbjct: 1013 ATITTTHTPSQQGTQETRNTT--KPKQESQFEFKAPQATQEQDFYTVELERGAKGFGFSL 1070

Query: 177  RAPR 188
            R  R
Sbjct: 1071 RGGR 1074


>AF401654-1|AAK94064.1| 1287|Homo sapiens MAGI-1B alpha beta protein.
          Length = 1287

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 6    AVAASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTRE---YTVNLHKRLHGVGFKK 176
            A   + + P  Q + E  +TT  KPK+  +        T+E   YTV L +   G GF  
Sbjct: 1108 ATITTTHTPSQQGTQETRNTT--KPKQESQFEFKAPQATQEQDFYTVELERGAKGFGFSL 1165

Query: 177  RAPR 188
            R  R
Sbjct: 1166 RGGR 1169


>AB010894-1|BAA32002.1| 1256|Homo sapiens BAI1-associated protein 1
            protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 6    AVAASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTRE---YTVNLHKRLHGVGFKK 176
            A   + + P  Q + E  +TT  KPK+  +        T+E   YTV L +   G GF  
Sbjct: 1109 ATITTTHTPSQQGTQETRNTT--KPKQESQFEFKAPQATQEQDFYTVELERGAKGFGFSL 1166

Query: 177  RAPR 188
            R  R
Sbjct: 1167 RGGR 1170


>U13680-1|AAA21348.1|  332|Homo sapiens lactate dehydrogenase-C
           protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 265 LFRRVSTLTSGVPICFSANLRISLIARGAR 176
           LF   S +TSG     SAN RI ++  GAR
Sbjct: 70  LFFSTSKITSGKDYSVSANSRIVIVTAGAR 99


>BC090043-1|AAH90043.1|  332|Homo sapiens lactate dehydrogenase C
           protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 265 LFRRVSTLTSGVPICFSANLRISLIARGAR 176
           LF   S +TSG     SAN RI ++  GAR
Sbjct: 70  LFFSTSKITSGKDYSVSANSRIVIVTAGAR 99


>BC064388-1|AAH64388.1|  332|Homo sapiens lactate dehydrogenase C
           protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 265 LFRRVSTLTSGVPICFSANLRISLIARGAR 176
           LF   S +TSG     SAN RI ++  GAR
Sbjct: 70  LFFSTSKITSGKDYSVSANSRIVIVTAGAR 99


>BC056871-1|AAH56871.1|  933|Homo sapiens phospholipase D2 protein.
          Length = 933

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 12  AASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLH 146
           A ++  P L  +    ST H   K++  E+ +N ++T  +  N H
Sbjct: 139 AGNREMPSLPRAGPEGSTRHAASKQKYLENYLNRLLTMSFYRNYH 183


>BC019249-1|AAH19249.3|  332|Homo sapiens lactate dehydrogenase C
           protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 265 LFRRVSTLTSGVPICFSANLRISLIARGAR 176
           LF   S +TSG     SAN RI ++  GAR
Sbjct: 70  LFFSTSKITSGKDYSVSANSRIVIVTAGAR 99


>AF038441-1|AAB96656.1|  922|Homo sapiens phospholipase D2 protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 12  AASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLH 146
           A ++  P L  +    ST H   K++  E+ +N ++T  +  N H
Sbjct: 139 AGNREMPSLPRAGPEGSTRHAASKQKCLENYLNRLLTMSFYRNYH 183


>AF038440-1|AAB96655.1|  933|Homo sapiens phospholipase D2 protein.
          Length = 933

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 12  AASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLH 146
           A ++  P L  +    ST H   K++  E+ +N ++T  +  N H
Sbjct: 139 AGNREMPSLPRAGPEGSTRHAASKQKYLENYLNRLLTMSFYRNYH 183


>AF035483-1|AAC24498.1|  933|Homo sapiens phospholipase D2 protein.
          Length = 933

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 12  AASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLH 146
           A ++  P L  +    ST H   K++  E+ +N ++T  +  N H
Sbjct: 139 AGNREMPSLPRAGPEGSTRHAASKQKYLENYLNRLLTMSFYRNYH 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,537,680
Number of Sequences: 237096
Number of extensions: 1064745
Number of successful extensions: 2406
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2406
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)