Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L19
(308 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-3|CAB63331.1| 122|Caenorhabditis elegans Hypothetical pr... 114 1e-26
Z82077-4|CAB63332.1| 70|Caenorhabditis elegans Hypothetical pr... 52 1e-07
U39855-5|AAA81084.1| 118|Caenorhabditis elegans Hypothetical pr... 30 0.29
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 0.87
Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical pr... 29 0.87
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 0.87
U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone... 28 1.2
AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 28 1.2
Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical p... 27 3.5
U40800-14|AAA81498.4| 727|Caenorhabditis elegans Hypothetical p... 27 3.5
AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical... 27 3.5
Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 26 4.7
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 26 4.7
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z75531-11|CAN86615.1| 129|Caenorhabditis elegans Hypothetical p... 26 6.2
Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical pr... 26 6.2
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 26 6.2
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 26 6.2
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 25 8.1
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 25 8.1
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 25 8.1
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 25 8.1
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 25 8.1
AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine re... 25 8.1
AF043693-7|AAB97540.1| 171|Caenorhabditis elegans Hypothetical ... 25 8.1
>Z82077-3|CAB63331.1| 122|Caenorhabditis elegans Hypothetical
protein W09C5.6a protein.
Length = 122
Score = 114 bits (275), Expect = 1e-26
Identities = 51/78 (65%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Frame = +3
Query: 78 PK-ERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDT 254
PK E+ S INEVVTREYT+++H R+ G+G KKRAPRAI EI++FA+ QM T DVRVDT
Sbjct: 3 PKNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDT 62
Query: 255 RLNKYLWSKGVRNVPFRV 308
+LNK++WSKG++NVP+RV
Sbjct: 63 KLNKFIWSKGIKNVPYRV 80
>Z82077-4|CAB63332.1| 70|Caenorhabditis elegans Hypothetical
protein W09C5.6b protein.
Length = 70
Score = 51.6 bits (118), Expect = 1e-07
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = +3
Query: 225 MGTPDVRVDTRLNKYLWSKGVRNVPFRV 308
M T DVRVDT+LNK++WSKG++NVP+RV
Sbjct: 1 MKTNDVRVDTKLNKFIWSKGIKNVPYRV 28
>U39855-5|AAA81084.1| 118|Caenorhabditis elegans Hypothetical
protein F18G5.1 protein.
Length = 118
Score = 30.3 bits (65), Expect = 0.29
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 21 KYGPGLQNSDERNSTTHGKPKERGKESAINEVVTRE 128
KYGP Q SD+ N T KE S N VT +
Sbjct: 55 KYGPNRQYSDDENETLSSDEKETENFSVQNPFVTHQ 90
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 121 VTTSFMADSFPLSLGLPCVVEFRSSEFC 38
+T F D FPL+ L C V SE C
Sbjct: 253 ITIDFNDDFFPLNCSLKCTVHLEDSENC 280
>Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical
protein C35C5.11 protein.
Length = 700
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 21 KYGPGLQNSDERNSTTHGKPKERGKESAINEV 116
+YGPGL N+ + T H K +ER ++ + +
Sbjct: 309 RYGPGLINNQKLRVTVHAKNEERKIQNVLGYI 340
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 121 VTTSFMADSFPLSLGLPCVVEFRSSEFC 38
+T F D FPL+ L C V SE C
Sbjct: 253 ITIDFNDDFFPLNCSLKCTVHLEDSENC 280
>U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 10 protein.
Length = 395
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 227 GYSRRKSRYPPKQISLVKRSQECS 298
GY++R RYPP I V+ S ECS
Sbjct: 96 GYTKRTRRYPP--IKKVEASDECS 117
>AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor
NHR-10 protein.
Length = 395
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 227 GYSRRKSRYPPKQISLVKRSQECS 298
GY++R RYPP I V+ S ECS
Sbjct: 96 GYTKRTRRYPP--IKKVEASDECS 117
>Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical
protein C35C5.2 protein.
Length = 745
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 21 KYGPGLQNSDERNSTTHGKPKER 89
+YGPGL N+ + T H + +ER
Sbjct: 315 RYGPGLINNQKLRVTVHAENEER 337
>U40800-14|AAA81498.4| 727|Caenorhabditis elegans Hypothetical
protein D2096.11 protein.
Length = 727
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 45 SDERNSTTHGKPKERGKESAINEVVTREYTVNLHKRLHGVGFKKRAPRA 191
S+ +NS + + A EV R+ V+L + G FKK A RA
Sbjct: 678 SNLKNSIVEPSSPSQSESRASPEVADRQKRVSLSLKEKGKRFKKNAERA 726
>AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical
protein K01A2.10 protein.
Length = 257
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 33 GLQNSDERNSTTHGKPKERGKESAINEVVTRE--YTVNLHKRL 155
G + +E+ T HG K + + +V+T + YT NL K++
Sbjct: 97 GNELREEKRKTLHGDDDSADKIAELEKVITEKEAYTKNLEKKV 139
>Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 274 QRYLFRRVSTLTSGVPICFSANLRISLIARGARFLKP 164
QR+ V LTS V IC ANL+ S A+ + P
Sbjct: 418 QRFPTHVVPILTSSVVICTQANLKKSAHKFAAQLMTP 454
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 274 QRYLFRRVSTLTSGVPICFSANLRISLIARGARFLKP 164
QR+ V LTS V IC ANL+ S A+ + P
Sbjct: 1225 QRFPTHVVPILTSSVVICTQANLKKSAHKFAAQLMTP 1261
>Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 274 QRYLFRRVSTLTSGVPICFSANLRISLIARGARFLKP 164
QR+ V LTS V IC ANL+ S A+ + P
Sbjct: 418 QRFPTHVVPILTSSVVICTQANLKKSAHKFAAQLMTP 454
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 274 QRYLFRRVSTLTSGVPICFSANLRISLIARGARFLKP 164
QR+ V LTS V IC ANL+ S A+ + P
Sbjct: 1225 QRFPTHVVPILTSSVVICTQANLKKSAHKFAAQLMTP 1261
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +3
Query: 168 FKKRAPRAIKEIRRFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFR 305
+ + PR KE+ PD T L W K V N FR
Sbjct: 325 YTENIPRGSKELENLIIAFARRPDSETYTELIFQFWKKFVENAKFR 370
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +3
Query: 168 FKKRAPRAIKEIRRFAEKQMGTPDVRVDTRLNKYLWSKGVRNVPFR 305
+ + PR KE+ PD T L W K V N FR
Sbjct: 325 YTENIPRGSKELENLIIAFARRPDSETYTELIFQFWKKFVENAKFR 370
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 274 QRYLFRRVSTLTSGVPICFSANLRISLIARGARFLKP 164
QR+ V LTS V IC ANL+ S A+ + P
Sbjct: 1225 QRFPTHVVPILTSSVVICTQANLKKSAHKFAAQLMTP 1261
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 15 ASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTR 125
A YG +N + N+ T+ E+ ESA+ ++V R
Sbjct: 547 AQTYGFYFRNIEHINALTNSAKHEKTMESALQDIVKR 583
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 15 ASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTR 125
A YG +N + N+ T+ E+ ESA+ ++V R
Sbjct: 547 AQTYGFYFRNIEHINALTNSAKHEKTMESALQDIVKR 583
>Z75531-11|CAN86615.1| 129|Caenorhabditis elegans Hypothetical
protein C54D10.13 protein.
Length = 129
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 164 WFQEACTPCYQGDPEIR*KTNGYSRRKSRYPPKQISLVKRSQEC 295
W QE C P Q + K + R S YP + V+ EC
Sbjct: 36 WVQELCPPSTQFCYRLSSKGRAFRRGCSDYPCATLPGVEPDMEC 79
>Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical
protein T01B4.2c protein.
Length = 712
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 285 LLLTKDICLGGYLLLRLEY 229
L++ CLGGY+ L LEY
Sbjct: 136 LMILGYACLGGYIFLTLEY 154
>Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical
protein T01B4.2b protein.
Length = 733
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 285 LLLTKDICLGGYLLLRLEY 229
L++ CLGGY+ L LEY
Sbjct: 157 LMILGYACLGGYIFLTLEY 175
>Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical
protein T01B4.2a protein.
Length = 757
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 285 LLLTKDICLGGYLLLRLEY 229
L++ CLGGY+ L LEY
Sbjct: 181 LMILGYACLGGYIFLTLEY 199
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 15 ASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTR 125
A YG +N + N+ T+ E+ ESA+ ++V R
Sbjct: 547 AQTYGFYFRNIEHINALTNSAKHEKTMESALQDIVKR 583
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 15 ASKYGPGLQNSDERNSTTHGKPKERGKESAINEVVTR 125
A YG +N + N+ T+ E+ ESA+ ++V R
Sbjct: 547 AQTYGFYFRNIEHINALTNSAKHEKTMESALQDIVKR 583
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 18 SKYGPGLQNSDERNSTTHGKPKERGKESAI 107
+K NSD N+T H K KES I
Sbjct: 361 TKRSNAASNSDSANNTAHKKSDVNSKESVI 390
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 18 SKYGPGLQNSDERNSTTHGKPKERGKESAI 107
+K NSD N+T H K KES I
Sbjct: 361 TKRSNAASNSDSANNTAHKKSDVNSKESVI 390
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 18 SKYGPGLQNSDERNSTTHGKPKERGKESAI 107
+K NSD N+T H K KES I
Sbjct: 361 TKRSNAASNSDSANNTAHKKSDVNSKESVI 390
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +2
Query: 182 TPCYQGDPEIR*KTNGYS--------RRKSRYPPKQISLVKRSQECS 298
TP G P +R KT+ Y K +YP + + + + S++CS
Sbjct: 35 TPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCS 81
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +2
Query: 182 TPCYQGDPEIR*KTNGYS--------RRKSRYPPKQISLVKRSQECS 298
TP G P +R KT+ Y K +YP + + + + S++CS
Sbjct: 36 TPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCS 82
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +2
Query: 182 TPCYQGDPEIR*KTNGYS--------RRKSRYPPKQISLVKRSQECS 298
TP G P +R KT+ Y K +YP + + + + S++CS
Sbjct: 36 TPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCS 82
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +2
Query: 182 TPCYQGDPEIR*KTNGYS--------RRKSRYPPKQISLVKRSQECS 298
TP G P +R KT+ Y K +YP + + + + S++CS
Sbjct: 36 TPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCS 82
>AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine
receptor, class j protein54 protein.
Length = 328
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 140 IYRIFTSNDFIYGRFLSSLLGFAMCRRI-SLVRILQPGSIFRRRH 9
IY IFT N +G + LL FA+ I S++ ++ P + R+
Sbjct: 26 IYLIFTENPTKFGNYRFLLLYFALFNLIFSIMNVVVPLDLHSYRY 70
>AF043693-7|AAB97540.1| 171|Caenorhabditis elegans Hypothetical
protein C34B2.8 protein.
Length = 171
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 23 IWTRAAEFGRAKFYDTWQTQ 82
+W + +E+ KFYD W Q
Sbjct: 145 LWRQHSEYAGPKFYDNWFPQ 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,139,373
Number of Sequences: 27780
Number of extensions: 162328
Number of successful extensions: 434
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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