Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L19
         (308 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 142 KFTVYSRVTTSFMADSFPLSLGLPCVVEF 56
           KF   + + T     SFP   GLP V  F
Sbjct: 912 KFMNVNMLDTYESVHSFPTETGLPFVYTF 940


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
 Frame = +3

Query: 30  PGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLHKRLHGVGFK-----KRAPRAI 194
           P   N++ER      KP+       I+   T  + V   K  HG   K     +   +  
Sbjct: 381 PTAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVT 440

Query: 195 KEIRRFAE 218
           + +RRF E
Sbjct: 441 EALRRFVE 448


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
 Frame = +3

Query: 30  PGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLHKRLHGVGFK-----KRAPRAI 194
           P   N++ER      KP+       I+   T  + V   K  HG   K     +   +  
Sbjct: 296 PTAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVT 355

Query: 195 KEIRRFAE 218
           + +RRF E
Sbjct: 356 EALRRFVE 363


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
 Frame = +3

Query: 30  PGLQNSDERNSTTHGKPKERGKESAINEVVTREYTVNLHKRLHGVGFK-----KRAPRAI 194
           P   N++ER      KP+       I+   T  + V   K  HG   K     +   +  
Sbjct: 615 PTAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVT 674

Query: 195 KEIRRFAE 218
           + +RRF E
Sbjct: 675 EALRRFVE 682


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,419
Number of Sequences: 438
Number of extensions: 2064
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)