Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L14
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21138-1|AAA63752.1| 192|Homo sapiens ribosomal protein L9 prot... 91 3e-18
U09954-1|AAB01041.1| 192|Homo sapiens ribosomal protein L9 prot... 91 3e-18
U09953-1|AAB01040.1| 192|Homo sapiens ribosomal protein L9 prot... 91 3e-18
D14531-1|BAA03401.1| 192|Homo sapiens rat ribosomal protein L9 ... 91 3e-18
BC111370-1|AAI11371.1| 192|Homo sapiens Unknown (protein for MG... 91 3e-18
BC100285-1|AAI00286.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
BC070214-1|AAH70214.1| 192|Homo sapiens RPL9 protein protein. 91 3e-18
BC066318-1|AAH66318.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
BC031906-1|AAH31906.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
BC012149-1|AAH12149.1| 192|Homo sapiens RPL9 protein protein. 91 3e-18
BC007967-1|AAH07967.1| 192|Homo sapiens RPL9 protein protein. 91 3e-18
BC004206-1|AAH04206.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
BC004156-1|AAH04156.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
BC000483-1|AAH00483.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
AY376242-1|AAQ82909.1| 192|Homo sapiens ribosomal protein L9 is... 91 3e-18
AB062431-1|BAB93494.1| 192|Homo sapiens ribosomal protein L9 pr... 91 3e-18
AK130277-1|BAC85318.1| 134|Homo sapiens protein ( Homo sapiens ... 69 1e-11
X13967-1|CAA32147.1| 202|Homo sapiens protein ( Human mRNA for ... 30 5.4
M63420-1|AAA51699.1| 202|Homo sapiens leukemia inhibitory facto... 30 5.4
M27053-1|AAA53188.1| 202|Homo sapiens differentiation-stimulati... 30 5.4
J03261-1|AAA59517.1| 195|Homo sapiens LIF protein. 30 5.4
BC093735-1|AAH93735.1| 202|Homo sapiens leukemia inhibitory fac... 30 5.4
BC093733-1|AAH93733.1| 202|Homo sapiens leukemia inhibitory fac... 30 5.4
BC078154-1|AAH78154.1| 595|Homo sapiens zinc finger protein 317... 30 5.4
BC069540-1|AAH69540.1| 202|Homo sapiens leukemia inhibitory fac... 30 5.4
BC026190-1|AAH26190.2| 504|Homo sapiens zinc finger protein 596... 30 5.4
AF307097-1|AAL29191.1| 510|Homo sapiens ZNF317-4 protein protein. 30 5.4
AF307096-1|AAL29190.1| 478|Homo sapiens ZNF317-3 protein protein. 30 5.4
AF275255-1|AAL29188.1| 595|Homo sapiens ZNF317-2 protein protein. 30 5.4
AF148135-1|AAL29182.1| 563|Homo sapiens ZNF317-1 protein protein. 30 5.4
AC004908-3|AAD05197.1| 430|Homo sapiens WUGSC:H_DJ0855D21.3 pro... 30 5.4
AC004264-1|AAC05174.1| 202|Homo sapiens leukemia inhibitory fac... 30 5.4
AB046808-1|BAB13414.1| 613|Homo sapiens KIAA1588 protein protein. 30 5.4
BC042681-1|AAH42681.2| 402|Homo sapiens zinc finger protein 547... 30 7.1
AK055662-1|BAB70979.1| 353|Homo sapiens protein ( Homo sapiens ... 30 7.1
U47621-1|AAC51792.1| 437|Homo sapiens nucleolar autoantigen No5... 29 9.4
BC011701-1|AAH11701.1| 437|Homo sapiens synaptonemal complex pr... 29 9.4
BC007942-1|AAH07942.1| 437|Homo sapiens synaptonemal complex pr... 29 9.4
BC001047-1|AAH01047.1| 437|Homo sapiens synaptonemal complex pr... 29 9.4
AK222945-1|BAD96665.1| 437|Homo sapiens synaptonemal complex pr... 29 9.4
AJ250583-1|CAC16786.1| 437|Homo sapiens nucleolar protein No55 ... 29 9.4
>U21138-1|AAA63752.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>U09954-1|AAB01041.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>U09953-1|AAB01040.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>D14531-1|BAA03401.1| 192|Homo sapiens rat ribosomal protein L9
homologue protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC111370-1|AAI11371.1| 192|Homo sapiens Unknown (protein for
MGC:131531) protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V EG ++E
Sbjct: 55 LRVVKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVMQEGGAMVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC100285-1|AAI00286.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC070214-1|AAH70214.1| 192|Homo sapiens RPL9 protein protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC066318-1|AAH66318.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC031906-1|AAH31906.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC012149-1|AAH12149.1| 192|Homo sapiens RPL9 protein protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC007967-1|AAH07967.1| 192|Homo sapiens RPL9 protein protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC004206-1|AAH04206.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC004156-1|AAH04156.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>BC000483-1|AAH00483.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>AY376242-1|AAQ82909.1| 192|Homo sapiens ribosomal protein L9
isoform protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>AB062431-1|BAB93494.1| 192|Homo sapiens ribosomal protein L9
protein.
Length = 192
Score = 91.1 bits (216), Expect = 3e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 414 LKVEKWFRFLNKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 593
L+V+KW+ KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++E
Sbjct: 55 LRVDKWWGN-RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVE 113
Query: 594 IR 599
IR
Sbjct: 114 IR 115
>AK130277-1|BAC85318.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ26767 fis, clone PRS02825. ).
Length = 134
Score = 68.9 bits (161), Expect = 1e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 447 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIR 599
KELA VRTV S+V+N IKGVT GF YKMR+ YAHFP + V E +++EIR
Sbjct: 60 KELATVRTVGSYVQNTIKGVTLGFCYKMRSAYAHFPTDIVIQEDGSLVEIR 110
>X13967-1|CAA32147.1| 202|Homo sapiens protein ( Human mRNA for
leukaemia inhibitory factor (LIF/HILDA). ).
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>M63420-1|AAA51699.1| 202|Homo sapiens leukemia inhibitory factor
protein.
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>M27053-1|AAA53188.1| 202|Homo sapiens differentiation-stimulating
factor protein.
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>J03261-1|AAA59517.1| 195|Homo sapiens LIF protein.
Length = 195
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 95 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 129
>BC093735-1|AAH93735.1| 202|Homo sapiens leukemia inhibitory factor
(cholinergic differentiation factor) protein.
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>BC093733-1|AAH93733.1| 202|Homo sapiens leukemia inhibitory factor
(cholinergic differentiation factor) protein.
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>BC078154-1|AAH78154.1| 595|Homo sapiens zinc finger protein 317
protein.
Length = 595
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 430 HFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
H S ++GR H CH Q + S L+RH+RI G
Sbjct: 212 HMSMYDGRKMHECH-QCQKAFTTSASLTRHRRIHTG 246
>BC069540-1|AAH69540.1| 202|Homo sapiens leukemia inhibitory factor
(cholinergic differentiation factor) protein.
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>BC026190-1|AAH26190.2| 504|Homo sapiens zinc finger protein 596
protein.
Length = 504
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 436 RNHFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
R H + NG HGCH + ES L RH+RI G
Sbjct: 351 RQHERSHNGEKPHGCH-LCGKAFTESSVLKRHERIHTG 387
>AF307097-1|AAL29191.1| 510|Homo sapiens ZNF317-4 protein protein.
Length = 510
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 430 HFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
H S ++GR H CH Q + S L+RH+RI G
Sbjct: 127 HMSMYDGRKMHECH-QCQKAFTTSASLTRHRRIHTG 161
>AF307096-1|AAL29190.1| 478|Homo sapiens ZNF317-3 protein protein.
Length = 478
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 430 HFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
H S ++GR H CH Q + S L+RH+RI G
Sbjct: 95 HMSMYDGRKMHECH-QCQKAFTTSASLTRHRRIHTG 129
>AF275255-1|AAL29188.1| 595|Homo sapiens ZNF317-2 protein protein.
Length = 595
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 430 HFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
H S ++GR H CH Q + S L+RH+RI G
Sbjct: 212 HMSMYDGRKMHECH-QCQKAFTTSASLTRHRRIHTG 246
>AF148135-1|AAL29182.1| 563|Homo sapiens ZNF317-1 protein protein.
Length = 563
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 430 HFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
H S ++GR H CH Q + S L+RH+RI G
Sbjct: 180 HMSMYDGRKMHECH-QCQKAFTTSASLTRHRRIHTG 214
>AC004908-3|AAD05197.1| 430|Homo sapiens WUGSC:H_DJ0855D21.3
protein.
Length = 430
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 436 RNHFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
R H + NG HGCH + ES L RH+RI G
Sbjct: 277 RQHERSHNGEKPHGCH-LCGKAFTESSVLKRHERIHTG 313
>AC004264-1|AAC05174.1| 202|Homo sapiens leukemia inhibitory factor
protein.
Length = 202
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 229 IVRLFTVYLFLGPNMKQIVANQKVKIPESLTVHVK 333
+V L+ + ++LG ++ I +QK+ P +L++H K
Sbjct: 102 LVELYRIVVYLGTSLGNITRDQKILNPSALSLHSK 136
>AB046808-1|BAB13414.1| 613|Homo sapiens KIAA1588 protein protein.
Length = 613
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 430 HFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
H S ++GR H CH Q + S L+RH+RI G
Sbjct: 230 HMSMYDGRKMHECH-QCQKAFTTSASLTRHRRIHTG 264
>BC042681-1|AAH42681.2| 402|Homo sapiens zinc finger protein 547
protein.
Length = 402
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 454 SSLFKNRNHFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
S+LF+ H+ G+ ++GC S+ + +E LSRHQR+ G
Sbjct: 281 SNLFR---HYRIHTGKRSYGC-SECGKFFMERSTLSRHQRVHTG 320
>AK055662-1|BAB70979.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ31100 fis, clone IMR321000242, weakly similar to
ZINC FINGER PROTEIN 33A. ).
Length = 353
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 454 SSLFKNRNHFSTFNGRINHGCHSQVFEVCLESEDLSRHQRISHG 323
S+LF+ H+ G+ ++GC S+ + +E LSRHQR+ G
Sbjct: 281 SNLFR---HYRIHTGKRSYGC-SECGKFFMERSTLSRHQRVHTG 320
>U47621-1|AAC51792.1| 437|Homo sapiens nucleolar autoantigen No55
protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 239 NLTMNVDNYFTVSFIKTNMHY--FNYIKL 159
NLT NV YF F+ T HY F Y KL
Sbjct: 278 NLTPNVGGYFVDKFVATMYHYLQFAYYKL 306
>BC011701-1|AAH11701.1| 437|Homo sapiens synaptonemal complex
protein SC65 protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 239 NLTMNVDNYFTVSFIKTNMHY--FNYIKL 159
NLT NV YF F+ T HY F Y KL
Sbjct: 278 NLTPNVGGYFVDKFVATMYHYLQFAYYKL 306
>BC007942-1|AAH07942.1| 437|Homo sapiens synaptonemal complex
protein SC65 protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 239 NLTMNVDNYFTVSFIKTNMHY--FNYIKL 159
NLT NV YF F+ T HY F Y KL
Sbjct: 278 NLTPNVGGYFVDKFVATMYHYLQFAYYKL 306
>BC001047-1|AAH01047.1| 437|Homo sapiens synaptonemal complex
protein SC65 protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 239 NLTMNVDNYFTVSFIKTNMHY--FNYIKL 159
NLT NV YF F+ T HY F Y KL
Sbjct: 278 NLTPNVGGYFVDKFVATMYHYLQFAYYKL 306
>AK222945-1|BAD96665.1| 437|Homo sapiens synaptonemal complex
protein SC65 variant protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 239 NLTMNVDNYFTVSFIKTNMHY--FNYIKL 159
NLT NV YF F+ T HY F Y KL
Sbjct: 278 NLTPNVGGYFVDKFVATMYHYLQFAYYKL 306
>AJ250583-1|CAC16786.1| 437|Homo sapiens nucleolar protein No55
protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 239 NLTMNVDNYFTVSFIKTNMHY--FNYIKL 159
NLT NV YF F+ T HY F Y KL
Sbjct: 278 NLTPNVGGYFVDKFVATMYHYLQFAYYKL 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,438,124
Number of Sequences: 237096
Number of extensions: 1836728
Number of successful extensions: 15530
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 15385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15530
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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