Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L12
(201 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 0.60
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 1.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 3.2
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 3.2
AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. 19 4.3
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 19 5.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 19 7.4
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 19 7.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 18 9.8
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 18 9.8
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 18 9.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 0.60
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 62 VSVLFRQCLIIWHAEGPLENRAP 130
VS+L +I W+ GP +R P
Sbjct: 309 VSILVTVIIINWNFRGPRTHRMP 331
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 1.1
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -2
Query: 116 PEG---PPHARLSNIDERAPRLVAGFLSAPGVLPERSLAP 6
PEG P H ++ I+E+ V + LPE L P
Sbjct: 405 PEGFMIPTHLKVLTIEEKPFVYVREIAFSESCLPEEILCP 444
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 19.8 bits (39), Expect = 3.2
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 50 SQLPVSVLFRQCLIIWHAEGPLENRAPPDAEVVTL 154
S L + L C +IW R P + +V+L
Sbjct: 65 SMLLIMSLVGNCCVIWIFSTSKSLRTPSNMFIVSL 99
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 19.8 bits (39), Expect = 3.2
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 50 SQLPVSVLFRQCLIIWHAEGPLENRAPPDAEVVTL 154
S L + L C +IW R P + +V+L
Sbjct: 65 SMLLIMSLVGNCCVIWIFSTSKSLRTPSNMFIVSL 99
>AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein.
Length = 88
Score = 19.4 bits (38), Expect = 4.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 26 VTHRVLRGSQ 55
+TH +LRG Q
Sbjct: 33 ITHNILRGMQ 42
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 19.0 bits (37), Expect = 5.6
Identities = 9/30 (30%), Positives = 11/30 (36%)
Frame = -3
Query: 148 DYLRVGRSSVLQRALRMPDYQTLTKEHRDW 59
DY + VL+ L P Y K W
Sbjct: 243 DYFDIPNELVLEVPLSHPTYDWFEKLELKW 272
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 18.6 bits (36), Expect = 7.4
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 20 APVTHRVLRGSQLP-VSVLFRQCLI 91
+PVTHR+ R ++ + VL R LI
Sbjct: 327 SPVTHRMARWVRVVFIQVLPRFLLI 351
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 5 EGRVIAPVTHRVLRGSQLPVSVL 73
+G I ++H + + +PVSVL
Sbjct: 127 QGGGIELISHIISKQLHIPVSVL 149
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -2
Query: 107 PPHARLSNIDERAP 66
PPH RL E P
Sbjct: 111 PPHPRLRREPEAEP 124
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -2
Query: 107 PPHARLSNIDERAP 66
PPH RL E P
Sbjct: 137 PPHPRLRREPEAEP 150
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 83 IDERAPRLVAGFLSAPGVLPE 21
+DE V FL PG +P+
Sbjct: 26 VDECQATPVIHFLQYPGCVPK 46
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 133 GRSSVLQRALRMPDYQTLTKEHRD 62
G ++VLQ +R ++ +H D
Sbjct: 57 GLAAVLQYLIRSGQLNIISSDHDD 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,905
Number of Sequences: 438
Number of extensions: 878
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2659293
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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