Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L06
(394 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC002400-2|AAC05812.1| 533|Homo sapiens Gene product with simil... 51 1e-06
BC013425-1|AAH13425.2| 318|Homo sapiens ubiquitin-like domain c... 29 5.5
AY444562-1|AAS68538.1| 318|Homo sapiens CTD-like phosphatase do... 29 5.5
AK057996-1|BAB71628.1| 318|Homo sapiens protein ( Homo sapiens ... 29 5.5
U07225-1|AAC04923.1| 377|Homo sapiens P2U nucleotide receptor p... 28 9.5
BC028135-1|AAH28135.1| 377|Homo sapiens purinergic receptor P2Y... 28 9.5
BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3 (Dr... 28 9.5
BC012104-1|AAH12104.1| 377|Homo sapiens purinergic receptor P2Y... 28 9.5
AY136753-1|AAN01279.1| 377|Homo sapiens purinergic receptor P2R... 28 9.5
AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3 (Dr... 28 9.5
AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens ... 28 9.5
>AC002400-2|AAC05812.1| 533|Homo sapiens Gene product with
similarity to Ubiquitin binding enzyme protein.
Length = 533
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +1
Query: 220 EQIEFTVIFNKAKHDITFAYDATVLELKAHLERICGVQQSAQKLIVKGMARDNMTLR 390
E ++ +I+NK KHD+ F D+T ELK + I G+ + QK++ KG+ ++ TLR
Sbjct: 308 ELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPEDKTLR 364
>BC013425-1|AAH13425.2| 318|Homo sapiens ubiquitin-like domain
containing CTD phosphatase 1 protein.
Length = 318
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 268 TFAYDATVLELKAHLERICGVQQSAQKLI---VKGMARDN 378
T + D TVL+LK L+ + GV QKL+ VKG +N
Sbjct: 18 TLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAEN 57
>AY444562-1|AAS68538.1| 318|Homo sapiens CTD-like phosphatase
domain-containing protein protein.
Length = 318
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 268 TFAYDATVLELKAHLERICGVQQSAQKLI---VKGMARDN 378
T + D TVL+LK L+ + GV QKL+ VKG +N
Sbjct: 18 TLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAEN 57
>AK057996-1|BAB71628.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ25267 fis, clone STM05473. ).
Length = 318
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 268 TFAYDATVLELKAHLERICGVQQSAQKLI---VKGMARDN 378
T + D TVL+LK L+ + GV QKL+ VKG +N
Sbjct: 18 TLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAEN 57
>U07225-1|AAC04923.1| 377|Homo sapiens P2U nucleotide receptor
protein.
Length = 377
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 116 STVFTGTIR*CIWIAVFCCISFL*CCTLHSFVGIL 12
STV +R + ++C I FL C ++H +G+L
Sbjct: 102 STVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVL 136
>BC028135-1|AAH28135.1| 377|Homo sapiens purinergic receptor P2Y,
G-protein coupled, 2 protein.
Length = 377
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 116 STVFTGTIR*CIWIAVFCCISFL*CCTLHSFVGIL 12
STV +R + ++C I FL C ++H +G+L
Sbjct: 102 STVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVL 136
>BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 28.3 bits (60), Expect = 9.5
Identities = 29/101 (28%), Positives = 43/101 (42%)
Frame = -1
Query: 394 SFLMSYYLLPCLLRLAFARIAVLHIFVLDELLIPKLSRHRQM*CHV*PY*ILQ*IRSVQG 215
+F Y+L +L A A+ HI DEL S Q C+ P + +R+++
Sbjct: 4 TFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQ--CN--PVHARERLRNIER 59
Query: 214 YHILQNLQRTLKYKLHSLRGLLCAIFRCQQLFYLPFLLVPL 92
L +Y +HSL C +F C Q + L VPL
Sbjct: 60 ICFLLRKLVLPEYSIHSL---FCIMFLCAQEWLTLGLNVPL 97
>BC012104-1|AAH12104.1| 377|Homo sapiens purinergic receptor P2Y,
G-protein coupled, 2 protein.
Length = 377
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 116 STVFTGTIR*CIWIAVFCCISFL*CCTLHSFVGIL 12
STV +R + ++C I FL C ++H +G+L
Sbjct: 102 STVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVL 136
>AY136753-1|AAN01279.1| 377|Homo sapiens purinergic receptor P2RY2
protein.
Length = 377
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 116 STVFTGTIR*CIWIAVFCCISFL*CCTLHSFVGIL 12
STV +R + ++C I FL C ++H +G+L
Sbjct: 102 STVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVL 136
>AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 28.3 bits (60), Expect = 9.5
Identities = 29/101 (28%), Positives = 43/101 (42%)
Frame = -1
Query: 394 SFLMSYYLLPCLLRLAFARIAVLHIFVLDELLIPKLSRHRQM*CHV*PY*ILQ*IRSVQG 215
+F Y+L +L A A+ HI DEL S Q C+ P + +R+++
Sbjct: 4 TFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQ--CN--PVHARERLRNIER 59
Query: 214 YHILQNLQRTLKYKLHSLRGLLCAIFRCQQLFYLPFLLVPL 92
L +Y +HSL C +F C Q + L VPL
Sbjct: 60 ICFLLRKLVLPEYSIHSL---FCIMFLCAQEWLTLGLNVPL 97
>AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ38993 fis, clone NT2RI2009194, highly similar to
CORNICHON-LIKE PROTEIN. ).
Length = 160
Score = 28.3 bits (60), Expect = 9.5
Identities = 29/101 (28%), Positives = 43/101 (42%)
Frame = -1
Query: 394 SFLMSYYLLPCLLRLAFARIAVLHIFVLDELLIPKLSRHRQM*CHV*PY*ILQ*IRSVQG 215
+F Y+L +L A A+ HI DEL S Q C+ P + +R+++
Sbjct: 4 TFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQ--CN--PVHARERLRNIER 59
Query: 214 YHILQNLQRTLKYKLHSLRGLLCAIFRCQQLFYLPFLLVPL 92
L +Y +HSL C +F C Q + L VPL
Sbjct: 60 ICFLLRKLVLPEYSIHSL---FCIMFLCAQEWLTLGLNVPL 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,462,853
Number of Sequences: 237096
Number of extensions: 783213
Number of successful extensions: 2152
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2149
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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