Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L06
(394 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 27 0.10
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 1.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 3.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 6.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.7
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 20 8.8
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 20 8.8
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 20 8.8
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 20 8.8
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 26.6 bits (56), Expect = 0.10
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 248 LNITVNSICSGIS--HTAESSADSEVQAALSAXSSMCDFSLSTVVLSTVFTGTI 93
LN +N + G++ HT + ++ ALS S+ + + VV+S TG +
Sbjct: 56 LNFNLNYVNKGVTYKHTIIEMDSNPIKTALSVCKSLIERQVYAVVVSHPLTGDL 109
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 23.0 bits (47), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 233 NSICSGISHTAESSADS 183
N+ SGI H+AESSA +
Sbjct: 25 NNDSSGIPHSAESSASN 41
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 3.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 193 QRTLKYKLHSLRGLLCAIFRCQQLFYLP 110
++TL Y ++ + + F C +FYLP
Sbjct: 231 RKTLFYTVNLILPTVLISFLCVLVFYLP 258
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 20.6 bits (41), Expect = 6.7
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = -2
Query: 138 FAVNSCFIYRFYW 100
+ ++ C +RFYW
Sbjct: 79 WVIHPCSSFRFYW 91
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 6.7
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = -2
Query: 138 FAVNSCFIYRFYW 100
+ ++ C +RFYW
Sbjct: 79 WVIHPCSSFRFYW 91
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 173 AALSAXSSMCDFSLSTVVLSTV 108
A +S + +C F L+T+V +TV
Sbjct: 425 ALVSDRALLCVFFLTTIVSTTV 446
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 6.7
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = -2
Query: 138 FAVNSCFIYRFYW 100
+ ++ C +RFYW
Sbjct: 79 WVIHPCSSFRFYW 91
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 205 LQNLQRTLKYKLHSLRGLLC 146
L LQ + H L+GLLC
Sbjct: 1448 LDELQLSRHATSHELKGLLC 1467
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 205 LQNLQRTLKYKLHSLRGLLC 146
L LQ + H L+GLLC
Sbjct: 1444 LDELQLSRHATSHELKGLLC 1463
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.2 bits (40), Expect = 8.8
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 353 ISFCADCC 330
+ FC DCC
Sbjct: 350 VPFCPDCC 357
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.2 bits (40), Expect = 8.8
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 353 ISFCADCC 330
+ FC DCC
Sbjct: 350 VPFCPDCC 357
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 20.2 bits (40), Expect = 8.8
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 353 ISFCADCC 330
+ FC DCC
Sbjct: 350 VPFCPDCC 357
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 20.2 bits (40), Expect = 8.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 250 KAKHDITFAYDATVLELKAHL 312
K KH T Y + VLE + ++
Sbjct: 448 KVKHSATLGYISRVLEKEPYV 468
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,753
Number of Sequences: 438
Number of extensions: 1620
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9638226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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