Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L05
(415 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 229 4e-60
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 229 4e-60
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 229 4e-60
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 229 4e-60
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 229 4e-60
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 229 4e-60
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 229 4e-60
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 229 4e-60
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 229 4e-60
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 229 4e-60
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 222 3e-58
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 222 3e-58
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 222 3e-58
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 222 3e-58
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 222 3e-58
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 222 3e-58
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 213 3e-55
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 0.87
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 0.87
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 0.87
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 0.87
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 0.87
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 0.87
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 0.87
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 2.0
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 3.5
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 3.5
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 3.5
EF108327-1|ABL14249.1| 502|Homo sapiens phosphodiesterase PDE7B... 29 6.1
BC075083-1|AAH75083.1| 450|Homo sapiens phosphodiesterase 7B pr... 29 6.1
BC075082-1|AAH75082.1| 450|Homo sapiens phosphodiesterase 7B pr... 29 6.1
AL360178-1|CAH73075.1| 450|Homo sapiens phosphodiesterase 7B pr... 29 6.1
AL138828-4|CAI95287.1| 450|Homo sapiens phosphodiesterase 7B pr... 29 6.1
AL133319-1|CAH73332.1| 450|Homo sapiens phosphodiesterase 7B pr... 29 6.1
AJ251860-1|CAB92441.1| 450|Homo sapiens phosphodiesterase 7B pr... 29 6.1
AB209990-1|BAE06072.1| 586|Homo sapiens PDE7B variant protein p... 29 6.1
AB038040-1|BAA96537.1| 450|Homo sapiens cyclic nucleotide phosp... 29 6.1
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 29 8.1
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 25 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 84
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 85 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 144
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 145 LETGKITDFIKFDTG 159
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 24 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 83
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 84 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 143
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 144 LETGKITDFIKFDTG 158
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 229 bits (559), Expect = 4e-60
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIY
Sbjct: 44 LIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D
Sbjct: 104 DTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI DFIKFD+G
Sbjct: 164 LETGKITDFIKFDTG 178
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 222 bits (543), Expect = 3e-58
Identities = 98/135 (72%), Positives = 117/135 (86%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+Y
Sbjct: 44 LIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D
Sbjct: 104 DTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI++FIKFD+G
Sbjct: 164 LGTGKIINFIKFDTG 178
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 222 bits (543), Expect = 3e-58
Identities = 98/135 (72%), Positives = 117/135 (86%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+Y
Sbjct: 43 LIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVY 102
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D
Sbjct: 103 DTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQID 162
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI++FIKFD+G
Sbjct: 163 LGTGKIINFIKFDTG 177
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 222 bits (543), Expect = 3e-58
Identities = 98/135 (72%), Positives = 117/135 (86%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+Y
Sbjct: 44 LIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D
Sbjct: 104 DTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI++FIKFD+G
Sbjct: 164 LGTGKIINFIKFDTG 178
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 222 bits (543), Expect = 3e-58
Identities = 98/135 (72%), Positives = 117/135 (86%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+Y
Sbjct: 44 LIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D
Sbjct: 104 DTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI++FIKFD+G
Sbjct: 164 LGTGKIINFIKFDTG 178
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 222 bits (543), Expect = 3e-58
Identities = 98/135 (72%), Positives = 117/135 (86%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+Y
Sbjct: 44 LIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D
Sbjct: 104 DTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI++FIKFD+G
Sbjct: 164 LGTGKIINFIKFDTG 178
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 222 bits (543), Expect = 3e-58
Identities = 98/135 (72%), Positives = 117/135 (86%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+Y
Sbjct: 44 LIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
D KGRF +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D
Sbjct: 104 DTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI++FIKFD+G
Sbjct: 164 LGTGKIINFIKFDTG 178
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 213 bits (519), Expect = 3e-55
Identities = 94/135 (69%), Positives = 113/135 (83%)
Frame = +1
Query: 10 LVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIY 189
L++FLRNRLKYALTG+EV KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y
Sbjct: 44 LIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVY 103
Query: 190 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 369
+ KG F +HRIT EEAKYKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D
Sbjct: 104 NTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQID 163
Query: 370 ISTNKIMDFIKFDSG 414
+ T KI FIKFD+G
Sbjct: 164 LGTGKITSFIKFDTG 178
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 255 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 383
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 255 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 383
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 255 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 383
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 255 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 383
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 0.87
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 121 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 267
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +3
Query: 267 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 368
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 255 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 383
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 231 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 347
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 121 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 267
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 31 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 207
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 208 TIHRI 222
HRI
Sbjct: 98 KKHRI 102
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 112 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 276
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 31 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 207
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 208 TIHRI 222
HRI
Sbjct: 843 KKHRI 847
>EF108327-1|ABL14249.1| 502|Homo sapiens phosphodiesterase PDE7B2
protein.
Length = 502
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 132 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 162
>BC075083-1|AAH75083.1| 450|Homo sapiens phosphodiesterase 7B
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>BC075082-1|AAH75082.1| 450|Homo sapiens phosphodiesterase 7B
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>AL360178-1|CAH73075.1| 450|Homo sapiens phosphodiesterase 7B
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>AL138828-4|CAI95287.1| 450|Homo sapiens phosphodiesterase 7B
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>AL133319-1|CAH73332.1| 450|Homo sapiens phosphodiesterase 7B
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>AJ251860-1|CAB92441.1| 450|Homo sapiens phosphodiesterase 7B
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>AB209990-1|BAE06072.1| 586|Homo sapiens PDE7B variant protein
protein.
Length = 586
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 216 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 246
>AB038040-1|BAA96537.1| 450|Homo sapiens cyclic nucleotide
phosphodiesterase 7B protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 141 HKSRRVRGVSPHFPVH-FDETLLHNLKHLIA 52
H SR +RG+ P P+H DE L +H+++
Sbjct: 80 HASRLLRGIIPQAPLHLLDEDYLGQARHMLS 110
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 10 LVIFLRNRLKYAL 48
L+IFLRNRLKYAL
Sbjct: 44 LIIFLRNRLKYAL 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,784,500
Number of Sequences: 237096
Number of extensions: 1408221
Number of successful extensions: 13030
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 12926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13030
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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