Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_L02
         (392 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.10 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.31 
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    23   0.95 
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      23   0.95 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.10
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 170 LPQPKMANTDLSRLLKSEEIRKVLRAPNKRV 262
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 68  HLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLP 175
           H   +  WT ++ +   P  G +KT SK    F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
          preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 75 PRCPPGASF 49
          PRCPPG+ F
Sbjct: 59 PRCPPGSKF 67


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 75 PRCPPGASF 49
          PRCPPG+ F
Sbjct: 59 PRCPPGSKF 67


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 314 STSPSYWSAGSISVS 270
           STSPSY   GS S S
Sbjct: 78  STSPSYPGGGSSSPS 92


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 157 EELQPAPAEDGQHRPQPSAEVRRDPQGP 240
           EE  P    DG++   PS E+     GP
Sbjct: 145 EEFVPGDDYDGKYLVLPSGELHIRDVGP 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,461
Number of Sequences: 438
Number of extensions: 1669
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)