Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_L01
(307 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 153 3e-38
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 142 6e-35
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 130 2e-31
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.18
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 31 0.24
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 27 2.2
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 27 2.9
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 27 2.9
03_05_0411 - 23972738-23973606,23977701-23977794,23978487-239785... 27 2.9
11_06_0643 - 25773250-25773843 27 3.8
06_03_0175 + 17553447-17553667,17555313-17555467,17555625-175557... 26 5.1
04_04_0295 - 24212526-24212684,24213066-24213218,24213497-242136... 26 5.1
01_05_0511 - 22831889-22832523,22833743-22833835,22834018-228342... 26 5.1
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 26 6.7
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 25 8.9
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846... 25 8.9
05_03_0363 - 12983243-12983304,12983526-12983658 25 8.9
02_05_0872 - 32369902-32370288,32370368-32370477,32370769-32371000 25 8.9
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844... 25 8.9
01_05_0535 - 23001864-23005052 25 8.9
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 153 bits (370), Expect = 3e-38
Identities = 67/93 (72%), Positives = 77/93 (82%)
Frame = +2
Query: 29 MGRRPARCYRYCKIKPYPKSRFGRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYR K KPYPKSR+ RGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHP 307
SSEALEA RI CNKY+ KN GKD FH+R+R+HP
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHP 93
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 142 bits (343), Expect = 6e-35
Identities = 62/89 (69%), Positives = 72/89 (80%)
Frame = +2
Query: 41 PARCYRYCKIKPYPKSRFGRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEA 220
P RCYR K KPYPKSR+ RGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 221 LEAGRICCNKYLVKNCGKDQFHIRMRLHP 307
LEA RI CNKY+ K+ GKD FH+R+ HP
Sbjct: 372 LEAARIACNKYMAKHAGKDAFHLRVCAHP 400
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 130 bits (315), Expect = 2e-31
Identities = 57/86 (66%), Positives = 69/86 (80%)
Frame = +2
Query: 50 CYRYCKIKPYPKSRFGRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 229
CYR K KPYPKSR+ RGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 230 GRICCNKYLVKNCGKDQFHIRMRLHP 307
RI CNKY+ K+ GKD FH+R+R+HP
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHP 89
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.18
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 152 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 271
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 257 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLS 150
R CC GL P P S+ R+ +L A S P+S
Sbjct: 179 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPVS 214
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 59 YCKIKPYPKSRFGRGVPDPKIRIFDLGKKRA 151
+C +PYPK VPD ++ GK +A
Sbjct: 395 FCMYEPYPKGSLEDDVPDTTVQDMLCGKAKA 425
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 293 SGCGTDLYRSSLRGTCCNR 237
+GCGT++ R ++ G CNR
Sbjct: 97 AGCGTNVSRDAVAGPTCNR 115
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 30 WGADQRDVIDIVRLNRILNLGLVGV 104
W ADQ D+I + +RIL LG +GV
Sbjct: 218 WPADQVDMIVVTDGSRILGLGDLGV 242
>03_05_0411 -
23972738-23973606,23977701-23977794,23978487-23978549,
23979558-23979630,23980325-23980375,23980491-23980906,
23981066-23981396,23983165-23983223,23983799-23983975
Length = 710
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 95 GRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNK 250
G G+ DP + D G+K A P + V Q+SS A EA NK
Sbjct: 153 GPGIDDPVKKEIDNGEKHAQNSSLPTNLGKVPQTRRQMSSNA-EASNHSSNK 203
>11_06_0643 - 25773250-25773843
Length = 197
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 293 SGCGTDLYRSSLRGTCCNRYG 231
S TD++ +S+ CC RYG
Sbjct: 144 SSSSTDVFLNSVSARCCRRYG 164
>06_03_0175 +
17553447-17553667,17555313-17555467,17555625-17555713,
17556253-17556376,17556920-17556989,17557345-17557441,
17559365-17559427,17559504-17559581,17559675-17559737
Length = 319
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 65 YNIDNISLVGAPLCSPQSD 9
Y D I L+G PLC P SD
Sbjct: 170 YPYDEIVLLGIPLCVPWSD 188
>04_04_0295 -
24212526-24212684,24213066-24213218,24213497-24213601,
24213694-24213913,24214033-24214199,24214323-24214497,
24214627-24214799,24214914-24214983,24215401-24215900
Length = 573
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 284 GTDLYRSSLRGTCCNRYGLLPAPQ 213
G D+ ++L+ C RYGL AP+
Sbjct: 59 GEDVDLNALKSAACRRYGLARAPK 82
>01_05_0511 -
22831889-22832523,22833743-22833835,22834018-22834215,
22834365-22834494,22834596-22834714,22835244-22835487,
22835607-22835807
Length = 539
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 266 SSLRGTCCNRYGLLPAPQNSAARTHQTLS 180
SS+ G C+ YG+ P+P+ + R LS
Sbjct: 281 SSVEGRDCSYYGVCPSPRGVSRRITDELS 309
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 278 DLYRSSLRGTCCNRYGLLPAPQNSAARTHQTLSARIV 168
+ R +L C N Y L AP N + LS++ V
Sbjct: 93 EFVRENLPAVCLNGYSTLLAPANEVLIPQELLSSKTV 129
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 74 PYPKSRFGRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSE 217
P P S G PD +++F R D P ++VS +Y+ SS+
Sbjct: 1053 PSPGSFSFGGDPDTFLQVFIWNGTRPVSRDGPWTGYMVSSQYQANSSD 1100
>09_05_0015 -
20083143-20083308,20083645-20084017,20084362-20084675,
20085164-20085512,20085678-20085837,20086307-20086618,
20086700-20086820,20087225-20087277
Length = 615
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 122 RIFDLGKKRATVDDFPL 172
R+ DLGK+RA + D PL
Sbjct: 76 RLEDLGKRRARLQDIPL 92
>05_03_0363 - 12983243-12983304,12983526-12983658
Length = 64
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 218 PQNSAARTHQTLSARIVGSHPLSLSFCP 135
P A TH L A V S PL +FCP
Sbjct: 21 PALHPASTHPALIAVSVASLPLPQNFCP 48
>02_05_0872 - 32369902-32370288,32370368-32370477,32370769-32371000
Length = 242
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/44 (20%), Positives = 23/44 (52%)
Frame = -3
Query: 305 GVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQNSAARTHQTLSAR 174
G+ ++ ++ S + + ++G+LP P+NS+ ++ R
Sbjct: 109 GIPNTTVSVSMHTSKYKDSTYVKFGILPNPRNSSISAQSIIALR 152
>01_07_0232 +
42182942-42183490,42183593-42183661,42184320-42184451,
42184547-42184600,42184714-42184758,42185383-42185522,
42185777-42185902,42185985-42186002,42186631-42187276,
42188121-42188843
Length = 833
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 166 EVIHCRSLFAQVENTDLWVRHTPTKP 89
+V+HC S + + LW+R P P
Sbjct: 473 DVVHCPSCSSYLHPPRLWLRAAPESP 498
>01_05_0535 - 23001864-23005052
Length = 1062
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 302 VVSSGCGTDLYRSSLRGTCCNRYGLL 225
V+ SGC +DLY S + R+G+L
Sbjct: 304 VLKSGCSSDLYVGSALVSAFARHGML 329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,469,587
Number of Sequences: 37544
Number of extensions: 192137
Number of successful extensions: 526
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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