Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_K23
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D31883-1|BAA06681.2| 724|Homo sapiens KIAA0059 protein. 31 0.65
BC002448-1|AAH02448.1| 401|Homo sapiens ABLIM1 protein protein. 31 0.65
AL354873-5|CAI10910.1| 718|Homo sapiens actin binding LIM prote... 31 0.65
AL354873-4|CAI10908.1| 778|Homo sapiens actin binding LIM prote... 31 0.65
AL354873-3|CAI10909.1| 846|Homo sapiens actin binding LIM prote... 31 0.65
AL354873-2|CAI10907.1| 702|Homo sapiens actin binding LIM prote... 31 0.65
AL354873-1|CAI10906.1| 651|Homo sapiens actin binding LIM prote... 31 0.65
AL133384-14|CAI40141.1| 718|Homo sapiens actin binding LIM prot... 31 0.65
AL133384-13|CAI40140.1| 778|Homo sapiens actin binding LIM prot... 31 0.65
AL133384-12|CAI40139.1| 846|Homo sapiens actin binding LIM prot... 31 0.65
AL133384-10|CAI40137.1| 173|Homo sapiens actin binding LIM prot... 31 0.65
AL133384-9|CAI40135.1| 455|Homo sapiens actin binding LIM prote... 31 0.65
AL133384-8|CAI40136.1| 401|Homo sapiens actin binding LIM prote... 31 0.65
AL133384-7|CAI40134.1| 530|Homo sapiens actin binding LIM prote... 31 0.65
AL133384-6|CAI40133.1| 702|Homo sapiens actin binding LIM prote... 31 0.65
AL133384-5|CAI40132.1| 172|Homo sapiens actin binding LIM prote... 31 0.65
AL133384-4|CAI40131.1| 651|Homo sapiens actin binding LIM prote... 31 0.65
AF005654-1|AAC51676.1| 778|Homo sapiens actin-binding double-zi... 31 0.65
BC125125-1|AAI25126.1| 956|Homo sapiens FBXO10 protein protein. 30 1.5
BC125124-1|AAI25125.1| 481|Homo sapiens FBXO10 protein protein. 30 1.5
AL513165-1|CAI16152.1| 954|Homo sapiens F-box protein 10 protein. 30 1.5
AB209610-1|BAD92847.1| 835|Homo sapiens PREDICTED: F-box protei... 30 1.5
AD000092-1|AAB51171.1| 1237|Homo sapiens hypothetical human seri... 30 2.0
AL354659-2|CAH70664.1| 528|Homo sapiens G patch domain containi... 29 4.6
AK001114-1|BAA91509.1| 528|Homo sapiens protein ( Homo sapiens ... 29 4.6
AB032961-1|BAA86449.2| 789|Homo sapiens KIAA1135 protein protein. 29 4.6
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 28 6.0
L13689-1|AAA19873.1| 326|Homo sapiens BMI-1 protein. 28 6.0
CR456911-1|CAG33192.1| 326|Homo sapiens COMMD3 protein. 28 6.0
BT019450-1|AAV38257.1| 326|Homo sapiens B lymphoma Mo-MLV inser... 28 6.0
BC014164-1|AAH14164.2| 735|Homo sapiens tetratricopeptide repea... 28 6.0
BC011652-1|AAH11652.1| 326|Homo sapiens BMI1 polycomb ring fing... 28 6.0
AL645608-9|CAI15571.2| 676|Homo sapiens chromosome 1 open readi... 28 6.0
AL158211-10|CAI15958.1| 326|Homo sapiens BMI1 polycomb ring fin... 28 6.0
AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens ... 28 6.0
AK094181-1|BAC04301.1| 696|Homo sapiens (EC 3.1.4.17). protein. 28 6.0
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 28 6.0
AC073502-2|AAY24194.1| 349|Homo sapiens unknown protein. 28 6.0
AC004257-1|AAC04897.1| 39|Homo sapiens Notch3 protein. 28 6.0
AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant... 28 6.0
BC082241-1|AAH82241.1| 1179|Homo sapiens USP19 protein protein. 28 8.0
AB023233-1|BAA76860.1| 793|Homo sapiens KIAA1016 protein protein. 28 8.0
>D31883-1|BAA06681.2| 724|Homo sapiens KIAA0059 protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 370 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 422
>BC002448-1|AAH02448.1| 401|Homo sapiens ABLIM1 protein protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 82 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 134
>AL354873-5|CAI10910.1| 718|Homo sapiens actin binding LIM protein
1 protein.
Length = 718
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 364 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 416
>AL354873-4|CAI10908.1| 778|Homo sapiens actin binding LIM protein
1 protein.
Length = 778
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 424 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 476
>AL354873-3|CAI10909.1| 846|Homo sapiens actin binding LIM protein
1 protein.
Length = 846
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 452 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 504
>AL354873-2|CAI10907.1| 702|Homo sapiens actin binding LIM protein
1 protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 348 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 400
>AL354873-1|CAI10906.1| 651|Homo sapiens actin binding LIM protein
1 protein.
Length = 651
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 332 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 384
>AL133384-14|CAI40141.1| 718|Homo sapiens actin binding LIM protein
1 protein.
Length = 718
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 364 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 416
>AL133384-13|CAI40140.1| 778|Homo sapiens actin binding LIM protein
1 protein.
Length = 778
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 424 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 476
>AL133384-12|CAI40139.1| 846|Homo sapiens actin binding LIM protein
1 protein.
Length = 846
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 452 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 504
>AL133384-10|CAI40137.1| 173|Homo sapiens actin binding LIM protein
1 protein.
Length = 173
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 108 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 160
>AL133384-9|CAI40135.1| 455|Homo sapiens actin binding LIM protein
1 protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 136 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 188
>AL133384-8|CAI40136.1| 401|Homo sapiens actin binding LIM protein
1 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 82 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 134
>AL133384-7|CAI40134.1| 530|Homo sapiens actin binding LIM protein
1 protein.
Length = 530
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 136 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 188
>AL133384-6|CAI40133.1| 702|Homo sapiens actin binding LIM protein
1 protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 348 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 400
>AL133384-5|CAI40132.1| 172|Homo sapiens actin binding LIM protein
1 protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 89 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 141
>AL133384-4|CAI40131.1| 651|Homo sapiens actin binding LIM protein
1 protein.
Length = 651
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 332 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 384
>AF005654-1|AAC51676.1| 778|Homo sapiens actin-binding
double-zinc-finger protein protein.
Length = 778
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 228 GVAPRGSSPTASPEPFAPSIDRVFNRISNNVSL*SEMRSNSSFSVTADMEDQY 70
G +PR SPT S E + DR+ +R ++ S+ S + S S++ T Q+
Sbjct: 424 GESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQH 476
>BC125125-1|AAI25126.1| 956|Homo sapiens FBXO10 protein protein.
Length = 956
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 224 WRLAAPPPPPHRNRSLRR*TEYSTGYRTT 138
WRL PP PH SLRR + G + T
Sbjct: 903 WRLVNPPARPHLENSLRRPSAAHNGQKVT 931
>BC125124-1|AAI25125.1| 481|Homo sapiens FBXO10 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 224 WRLAAPPPPPHRNRSLRR*TEYSTGYRTT 138
WRL PP PH SLRR + G + T
Sbjct: 428 WRLVNPPARPHLENSLRRPSAAHNGQKVT 456
>AL513165-1|CAI16152.1| 954|Homo sapiens F-box protein 10 protein.
Length = 954
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 224 WRLAAPPPPPHRNRSLRR*TEYSTGYRTT 138
WRL PP PH SLRR + G + T
Sbjct: 901 WRLVNPPARPHLENSLRRPSAAHNGQKVT 929
>AB209610-1|BAD92847.1| 835|Homo sapiens PREDICTED: F-box protein
10 variant protein.
Length = 835
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 224 WRLAAPPPPPHRNRSLRR*TEYSTGYRTT 138
WRL PP PH SLRR + G + T
Sbjct: 782 WRLVNPPARPHLENSLRRPSAAHNGQKVT 810
>AD000092-1|AAB51171.1| 1237|Homo sapiens hypothetical human
serine-threonine protein kinase R31240_1 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 243 HGCTGGVAPRGSSPTASP 190
HGC V P GSSP ASP
Sbjct: 573 HGCVSVVDPHGSSPLASP 590
>AL354659-2|CAH70664.1| 528|Homo sapiens G patch domain containing
2 protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 GPPGTPERNSYSPVSSAALHEYWSSMSAVTENDELDLISD 127
GP G +SP S H++W S A TE+D+ L+ D
Sbjct: 371 GPVGNKRMVHFSPDSHH--HDHWFSPGARTEHDQHQLLRD 408
>AK001114-1|BAA91509.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ10252 fis, clone HEMBB1000807. ).
Length = 528
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 GPPGTPERNSYSPVSSAALHEYWSSMSAVTENDELDLISD 127
GP G +SP S H++W S A TE+D+ L+ D
Sbjct: 371 GPVGNKRMVHFSPDSHH--HDHWFSPGARTEHDQHQLLRD 408
>AB032961-1|BAA86449.2| 789|Homo sapiens KIAA1135 protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 98 ENDELDLISDYNDTLFDILLNTLSIDGANGSGEAVGEEPRG 220
EN+E +L S + L D + NT+ DG+N G EE G
Sbjct: 176 ENEEREL-SPPLEQLIDHMANTVEADGSNDEGYEAAEEGLG 215
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 251 PGATGARGAWRLAAPPPPPHRNRSL 177
PGA G R R +PPPPP R+L
Sbjct: 3 PGARGRRRRRRPMSPPPPPPPVRAL 27
>L13689-1|AAA19873.1| 326|Homo sapiens BMI-1 protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 VRHSTSGASGRXXXXXXXXCD-VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVFNR 151
+ H G + D + AG T P S+P SP P P I N
Sbjct: 236 ISHQRDGLTNAGELESDSGSDKANSPAGGVPSTSSCLPSPSTPVQSPHPQFPHISSTMNG 295
Query: 150 ISNNVS 133
SN+ S
Sbjct: 296 TSNSPS 301
>CR456911-1|CAG33192.1| 326|Homo sapiens COMMD3 protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 VRHSTSGASGRXXXXXXXXCD-VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVFNR 151
+ H G + D + AG T P S+P SP P P I N
Sbjct: 236 ISHQRDGLTNAGELESDSGSDKANSPAGGIPSTSSCLPSPSTPVQSPHPQFPHISSTMNG 295
Query: 150 ISNNVS 133
SN+ S
Sbjct: 296 TSNSPS 301
>BT019450-1|AAV38257.1| 326|Homo sapiens B lymphoma Mo-MLV
insertion region (mouse) protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 VRHSTSGASGRXXXXXXXXCD-VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVFNR 151
+ H G + D + AG T P S+P SP P P I N
Sbjct: 236 ISHQRDGLTNAGELESDSGSDKANSPAGGIPSTSSCLPSPSTPVQSPHPQFPHISSTMNG 295
Query: 150 ISNNVS 133
SN+ S
Sbjct: 296 TSNSPS 301
>BC014164-1|AAH14164.2| 735|Homo sapiens tetratricopeptide repeat
domain 15 protein.
Length = 735
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 264 VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVF 157
V G GR P+ ++P ASPEPFA I VF
Sbjct: 253 VPGTEGRPEPVAMRGPQAAAPPASPEPFA-HIQAVF 287
>BC011652-1|AAH11652.1| 326|Homo sapiens BMI1 polycomb ring finger
oncogene protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 VRHSTSGASGRXXXXXXXXCD-VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVFNR 151
+ H G + D + AG T P S+P SP P P I N
Sbjct: 236 ISHQRDGLTNAGELESDSGSDKANSPAGGIPSTSSCLPSPSTPVQSPHPQFPHISSTMNG 295
Query: 150 ISNNVS 133
SN+ S
Sbjct: 296 TSNSPS 301
>AL645608-9|CAI15571.2| 676|Homo sapiens chromosome 1 open reading
frame 170 protein.
Length = 676
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 248 GATGARGAWRLAAPPPPPHRNRSLR 174
GA G GAW A P PH+ R L+
Sbjct: 419 GAHGGPGAWEAVAVGPRPHQPRILK 443
>AL158211-10|CAI15958.1| 326|Homo sapiens BMI1 polycomb ring finger
oncogene protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 VRHSTSGASGRXXXXXXXXCD-VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVFNR 151
+ H G + D + AG T P S+P SP P P I N
Sbjct: 236 ISHQRDGLTNAGELESDSGSDKANSPAGGIPSTSSCLPSPSTPVQSPHPQFPHISSTMNG 295
Query: 150 ISNNVS 133
SN+ S
Sbjct: 296 TSNSPS 301
>AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens
cDNA FLJ41861 fis, clone NTONG2008672. ).
Length = 676
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 248 GATGARGAWRLAAPPPPPHRNRSLR 174
GA G GAW A P PH+ R L+
Sbjct: 419 GAHGGPGAWEAVAVGPRPHQPRILK 443
>AK094181-1|BAC04301.1| 696|Homo sapiens (EC 3.1.4.17). protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 264 VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVF 157
V G GR P+ ++P ASPEPFA I VF
Sbjct: 236 VPGTEGRPEPVAMRGPQAAAPPASPEPFA-HIQAVF 270
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 251 PGATGARGAWRLAAPPPPPHRNRSL 177
PGA G R R +PPPPP R+L
Sbjct: 3 PGARGRRRRRRPMSPPPPPPPVRAL 27
>AC073502-2|AAY24194.1| 349|Homo sapiens unknown protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 264 VDGVAGRHGCTGGVAPRGSSPTASPEPFAPSIDRVF 157
V G GR P+ ++P ASPEPFA I VF
Sbjct: 253 VPGTEGRPEPVAMRGPQAAAPPASPEPFA-HIQAVF 287
>AC004257-1|AAC04897.1| 39|Homo sapiens Notch3 protein.
Length = 39
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 251 PGATGARGAWRLAAPPPPPHRNRSL 177
PGA G R R +PPPPP R+L
Sbjct: 3 PGARGRRRRRRPMSPPPPPPPVRAL 27
>AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant
protein.
Length = 1289
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 251 PGATGARGAWRLAAPPPPPHRNRSL 177
PGA G R R +PPPPP R+L
Sbjct: 6 PGARGRRRRRRPMSPPPPPPPVRAL 30
>BC082241-1|AAH82241.1| 1179|Homo sapiens USP19 protein protein.
Length = 1179
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 252 AGRHGCTGGVAPRGSSPTASPEPFAPSIDRVFNRISN 142
A G G AP + +PE FAP++DR SN
Sbjct: 1138 AASQGLGPGQAPEVAPTRTAPERFAPTVDRPAPTYSN 1174
>AB023233-1|BAA76860.1| 793|Homo sapiens KIAA1016 protein protein.
Length = 793
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 261 DGVAGRHGCTGGVAPRGSSPTASPEPFAPSI 169
D AG G GG + ++P + P+PF P++
Sbjct: 50 DPPAGAAGRGGGAREKMATPGSEPQPFVPAL 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,117,424
Number of Sequences: 237096
Number of extensions: 890648
Number of successful extensions: 6043
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6011
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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