Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_K23
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical pr... 33 0.064
U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z83233-6|CAB05763.1| 355|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 1.8
U58760-1|AAK31461.1| 244|Caenorhabditis elegans Interactor of f... 28 1.8
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 27 3.2
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 26 5.5
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 26 5.5
AC006618-3|AAK68251.3| 960|Caenorhabditis elegans Patched relat... 26 5.5
Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical pr... 26 7.3
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 26 7.3
AF077537-1|AAC26273.2| 111|Caenorhabditis elegans Hypothetical ... 26 7.3
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 26 7.3
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 26 7.3
Z81549-10|CAI79203.1| 128|Caenorhabditis elegans Hypothetical p... 25 9.7
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 25 9.7
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 25 9.7
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 25 9.7
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 25 9.7
>Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical
protein F33H2.3 protein.
Length = 229
Score = 32.7 bits (71), Expect = 0.064
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 92 VTENDELDLISDYNDTLFDILLNTLSIDGANGSGEAVGEEPRG 220
++ N L L+ DY + +F+++ + +DG + GE V EE G
Sbjct: 120 LSNNPSLGLLEDYREKMFEMIPSLKILDGCDVDGEEVEEEFAG 162
>U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical
protein T19H12.2 protein.
Length = 225
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 92 VTENDELDLISDYNDTLFDILLNTLSIDGANGSGEAVGEE 211
++ N L L+ DY +F+++ + +DG + GE V EE
Sbjct: 117 LSNNSSLGLLDDYRVKMFEMIPSLKILDGCDVDGEEVEEE 156
>Z83233-6|CAB05763.1| 355|Caenorhabditis elegans Hypothetical
protein K06B4.6 protein.
Length = 355
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 83 MSAVTENDELDLISDYNDTLFDILLNTLSI 172
M A ++ND + I +Y D FD LLN L +
Sbjct: 83 MKAASKNDRIVSIGNYEDYNFDKLLNDLIV 112
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -1
Query: 315 TSGASGRXXXXXXXXCDVDGVAGRHGCTGGVAPRGSSPTASPEPFAP 175
T G G G AG G G P G+SPTA+P P
Sbjct: 206 TPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGP 252
>U58760-1|AAK31461.1| 244|Caenorhabditis elegans Interactor of
fizzy protein protein1 protein.
Length = 244
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 26 ERNSYSPVSSAALHEYWSSMSAVTENDELDLISDYNDTLFDILLNTLSIDGANGSGEAVG 205
E++ SP+ +A E + S++A E+D L+L D + L + ID A EA+
Sbjct: 99 EKHPCSPIDTANRCETFDSLAADIEDDMLNL-EDQDVVLSEDRPYGDVIDPAESEAEALA 157
Query: 206 E---EPRGATPPVHP 241
E E + PP+ P
Sbjct: 158 ELGVEEWDSYPPIDP 172
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 261 DGVAGRHGCTGGVAPRGSSPTASPEPFAPS 172
DG+AGR G G PRG P+ +P P+
Sbjct: 161 DGLAGRPGARGSPGPRG--PSGNPGADGPA 188
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 261 DGVAGRHGCTGGVAPRGSSPTASPEPFAPS 172
DG+AGR G G PRG P+ +P P+
Sbjct: 214 DGLAGRPGARGSPGPRG--PSGNPGADGPA 241
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 258 GVAGRHGCTGGVAPRGSSPTASPEPFAP 175
G AG G G P G+SPTA+P P
Sbjct: 226 GPAGPPGPAGPPGPDGASPTAAPGAAGP 253
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 188 SGEAVGEEPRGATPPVHPWR 247
+G A +EPR ATPP P R
Sbjct: 553 NGYAAPQEPRRATPPPEPLR 572
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +3
Query: 78 PPCPLSPRTTSWTSSQTIMTRC----SISC*ILCLSTE 179
P CP+ + WT+++T T C I+ CLST+
Sbjct: 21 PVCPVGGLWSDWTTTETCATTCGGCSQINYSRTCLSTQ 58
>AC006618-3|AAK68251.3| 960|Caenorhabditis elegans Patched related
family protein 4 protein.
Length = 960
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 14 PGTPERNSYSPVSSAALHEYWSSMSAVTENDELDLISDYNDTLFD 148
P T E N L+EYW S+S EN +L I +ND D
Sbjct: 292 PATAENNRAYYAYRQKLNEYWESIS---ENIDLQFI-PHNDKAMD 332
>Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 219 PRGSSPTASPEPFAPSID 166
PRGSSP A P AP D
Sbjct: 804 PRGSSPPAPSAPSAPETD 821
>Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 219 PRGSSPTASPEPFAPSID 166
PRGSSP A P AP D
Sbjct: 804 PRGSSPPAPSAPSAPETD 821
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 234 TGGVAPRGSSPTASPEPFAPSIDRVFNRIS 145
T + PR S+P ++P P+ R +RIS
Sbjct: 255 TSNITPRQSTPGSTPSRINPTAPRKSSRIS 284
>AF077537-1|AAC26273.2| 111|Caenorhabditis elegans Hypothetical
protein F16G10.5 protein.
Length = 111
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 254 WPGATGARGAWRLAAPPPPPHRNRS 180
W RGA PPPPP R R+
Sbjct: 29 WREGRWVRGAREDREPPPPPRRPRT 53
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 25.8 bits (54), Expect = 7.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 254 WPGATGARGAWRLAAPPPPP 195
+P A G G APPPPP
Sbjct: 19 FPSAGGGGGGCGCGAPPPPP 38
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 234 TGGVAPRGSSPTASPEPFAPSIDRVFNRIS 145
T + PR S+P ++P P+ R +RIS
Sbjct: 255 TSNITPRQSTPGSTPSRINPTAPRKSSRIS 284
>Z81549-10|CAI79203.1| 128|Caenorhabditis elegans Hypothetical
protein F55C9.12 protein.
Length = 128
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 174 TERTVPVRRWGRSREAPRP 230
T +T+P RW RS + P P
Sbjct: 12 TPKTLPTGRWKRSADVPLP 30
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 126 SEMRSNSSFSVTADMEDQYSCSAALDTGEYEF 31
S R + +VT + E QYSC D GE F
Sbjct: 2246 SNDRRLTILNVTENDEGQYSCRVKNDAGENSF 2277
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 126 SEMRSNSSFSVTADMEDQYSCSAALDTGEYEF 31
S R + +VT + E QYSC D GE F
Sbjct: 2246 SNDRRLTILNVTENDEGQYSCRVKNDAGENSF 2277
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 126 SEMRSNSSFSVTADMEDQYSCSAALDTGEYEF 31
S R + +VT + E QYSC D GE F
Sbjct: 2246 SNDRRLTILNVTENDEGQYSCRVKNDAGENSF 2277
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 126 SEMRSNSSFSVTADMEDQYSCSAALDTGEYEF 31
S R + +VT + E QYSC D GE F
Sbjct: 2246 SNDRRLTILNVTENDEGQYSCRVKNDAGENSF 2277
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 126 SEMRSNSSFSVTADMEDQYSCSAALDTGEYEF 31
S R + +VT + E QYSC D GE F
Sbjct: 2246 SNDRRLTILNVTENDEGQYSCRVKNDAGENSF 2277
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 245 ATGARGAWRLAAPPPPPHRNRSLRR 171
+T A AAPPPPP + S +R
Sbjct: 270 STRVESAASAAAPPPPPSSSSSSKR 294
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 245 ATGARGAWRLAAPPPPPHRNRSLRR 171
+T A AAPPPPP + S +R
Sbjct: 405 STRVESAASAAAPPPPPSSSSSSKR 429
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 245 ATGARGAWRLAAPPPPPHRNRSLRR 171
+T A AAPPPPP + S +R
Sbjct: 450 STRVESAASAAAPPPPPSSSSSSKR 474
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,610,828
Number of Sequences: 27780
Number of extensions: 129083
Number of successful extensions: 951
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -