Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_K16
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   1.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   4.3  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   5.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.5  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   10.0 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   10.0 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   10.0 

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 474 KFDIKKNLFVCVCP 433
           ++D+KKNL VC+ P
Sbjct: 429 QYDLKKNLKVCLPP 442


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 430 IWAYTDKQIFFNVKFKMSNS 489
           +W Y DK I + VK  +  S
Sbjct: 143 LWLYKDKTILYMVKLTLKLS 162


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 394 TLHNRKSMSRIYVNMIQLFEI 332
           T+HN     ++Y N+I + +I
Sbjct: 322 TIHNNNYNKKLYYNIINIEQI 342


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 131 PLYPLICIVFY 99
           PLY L CI+F+
Sbjct: 204 PLYQLSCILFF 214


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 EVRLSA*NSYIFYTHNRLHN*KTILVKAVNI 321
           E ++ + N+Y +  +N  +N K +    +NI
Sbjct: 300 ETKIISSNNYNYKNYNNNYNSKKLYYNIINI 330


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 EVRLSA*NSYIFYTHNRLHN*KTILVKAVNI 321
           E ++ + N+Y +  +N  +N K +    +NI
Sbjct: 311 ETKIISSNNYNYKNYNNNYNSKKLYYNIINI 341


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 456 NLFVCVCPDLTQKRLKRFF 400
           N  + + PDL  K++  FF
Sbjct: 229 NSLMVILPDLVGKKITHFF 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,947
Number of Sequences: 438
Number of extensions: 2694
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)