Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_K13
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 49 6e-07
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 43 3e-05
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 42 7e-05
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 33 0.044
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 30 0.23
SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces pomb... 29 0.54
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.8
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 3.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.6
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 25 6.6
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 6.6
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.6
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 25 6.6
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 25 6.6
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.8
SPAC323.05c |||S-adenosylmethionine-dependent methyltransferase ... 25 8.8
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 25 8.8
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 48.8 bits (111), Expect = 6e-07
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Frame = +1
Query: 22 LAWYLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVVLTDSVALPRSLRHLSSCCEAN 201
LA Y+ +R +VLELG G GLP I++A GA+ V++ P + +L +
Sbjct: 64 LANYIDKNPDTVRAKKVLELGAGAGLPSIVSAFDGAKFVVSTDYPDPALIDNLEHNVKQY 123
Query: 202 GLVPNRDVQIVGLSWGLFLSEI------HNLQPVDLLLASDCFYEPTQFEEVLSTVAYLL 363
+ ++ + VG WG + E+ + + D+LL SD + T+ +++ + +
Sbjct: 124 AEIASK-ISAVGYLWGSNIKEVMSNAGFKDNEVFDILLLSDLVFNHTEHSKLIKSCKMAI 182
Query: 364 EG 369
EG
Sbjct: 183 EG 184
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 43.2 bits (97), Expect = 3e-05
Identities = 34/95 (35%), Positives = 46/95 (48%)
Frame = +1
Query: 22 LAWYLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVVLTDSVALPRSLRHLSSCCEAN 201
LA Y++ Q G+RVLELG GTGL IL AK G+ V+ TD + N
Sbjct: 159 LAEYIY-QHPVQSGMRVLELGAGTGLVSILCAKMGSIVLATDGDT------KVCDGVREN 211
Query: 202 GLVPNRDVQIVGLSWGLFLSEIHNLQPVDLLLASD 306
+ N D+ + L WG+ E D++ ASD
Sbjct: 212 ARLNNCDINVKKLLWGVDPPEFS-----DIVFASD 241
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 41.9 bits (94), Expect = 7e-05
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Frame = +1
Query: 7 GSAPLLAWYLWTQRRHLRGLRVLELGCGTGLPGILAA-KCGARVVLTDSVALPRSLRHLS 183
GSAPLL+ L + LELG GTGL GI AA + G +VV TD LP + ++
Sbjct: 118 GSAPLLSANLPKWEDLSNSINALELGAGTGLVGISAAIQLGWQVVCTD---LPDIVENMQ 174
Query: 184 SCCEANGLVPNR---DVQIVGLSWGLFLSEIHN----LQPVDLLLASDCFYEPTQFEEVL 342
+ N + + V L W + + ++P ++ASDC YE T F E+
Sbjct: 175 YNVDYNSELIQQYAGSVSCHVLDWMNPPDDDNRPSWLIKPFQRIIASDCIYE-THFGELA 233
Query: 343 STVAYLLEGTDARFLCSYQERST 411
+ D + Y R T
Sbjct: 234 IALFRKYLAKDGIVITEYPLRET 256
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 32.7 bits (71), Expect = 0.044
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 31 YLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVV 138
+++ + G VL++GCGTG+ + AK GA+ V
Sbjct: 246 FVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKV 281
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 30.3 bits (65), Expect = 0.23
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 43 QRRHL-RGLRVLELGCGTGLPGILAAKCGARVV 138
Q HL R VL++GCGTG+ + A+ GA+ V
Sbjct: 48 QNPHLFRDKIVLDVGCGTGILSMFCARAGAKHV 80
>SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 405
Score = 29.1 bits (62), Expect = 0.54
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Frame = +1
Query: 16 PLLAWYLWTQRRHLRGLRVLELGCG-TGLPGILAAKCGARVVLTDSVALPRSLRHLSSCC 192
P L W +LELG G +GL GIL + V +D + +R
Sbjct: 80 PWLLQQSWFMNSLTPKTSILELGSGISGLAGILLSPFVGNYVASDKQLYLKKIRENLDQN 139
Query: 193 EANGLVPNRDVQIVGLSW-GLFLSEIHNLQPVDLLLASDCFYEPTQFEEVLSTVAYLLE 366
A+ DV++ L W + +D +L DC Y P ++S +A L E
Sbjct: 140 NAS------DVEVHELDWKSTPYPKDWTFDFLDYVLFFDCIYNPHLNAHLVSCLASLAE 192
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 242 DRPTICTSRLGTKPLASQHDDKCRRDLGKATLSVRTTRAPHFAAKIPGKPVPQP 81
+R +I ++ +GT P A + K + + +S T + A IP KP PQP
Sbjct: 76 NRASIMSATMGTPPSALKFSKK---KISRPVVSEDTFKDKLPRATIPVKPEPQP 126
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 440 FLSKASIDQSVLRSW*EHKNRASVPSSR 357
F+SKASI V+ S+ HK +V S+R
Sbjct: 759 FVSKASITSGVIESYGLHKRVEAVKSTR 786
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 534 PSRDSSSIGYGQHSKSCSPICGQFTLDS 617
P R+ S++ Y HS+ C Q +LDS
Sbjct: 1234 PVRNRSAVNYSLHSQLCEKFNVQESLDS 1261
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 116 AAKIPGKPVPQPSSRTRNPRKCLL 45
AA + KP +PSS T+ ++C+L
Sbjct: 178 AAMLKHKPKVKPSSGTKKKKRCIL 201
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 91 TGLPGILAAKCGARVVLTDSVALP-RSLRHLSSCCEANG 204
TG+ ++++K GA+VVLT + + R + L ANG
Sbjct: 496 TGIAALVSSKDGAKVVLTGNHRMKVRPIGPLVDALRANG 534
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 203 PLASQHDDKCRRDLGKATLSVRTTRAPHFAAKI 105
PLA+ R D GK L ++T HF +K+
Sbjct: 44 PLANSRYATVREDNGKLYLYMKTIERAHFPSKL 76
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 EIHNLQ-PVDLLLASDCFYEPTQFEEVLSTVAYLLEGTDARFL 387
E+ N+ P LL + EP + VL+++AY +EG+D R +
Sbjct: 284 EVENVDVPGRTLLKVPGYDEPVEVG-VLTSIAYAVEGSDERIV 325
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 214 NRDVQIVGLSWGLFLSEIHNLQPVDLLLASDCFYEPTQFE 333
+RDV G S G+ LS++H D+LL + P +++
Sbjct: 273 SRDVAAEGYSTGIILSQLH-----DVLLKEETLSSPVKYK 307
>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 177
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 250 GPTIGRLFARHGWVPSRWLHNTMINVAEIL 161
G G +FAR+ P+RWL ++ A +
Sbjct: 84 GGMAGNIFARNRIAPARWLITSLSTAATFM 113
>SPAC323.05c |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.0 bits (52), Expect = 8.8
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = +1
Query: 43 QRRHLRGLRVLELGCGTGLPGILAAKCGARVVLTDSVALPRSLRHLSSCCEANGLVPNRD 222
Q ++ L E+GCG+G K G +L + + +S C A+ + +
Sbjct: 41 QMAEMKNLLTAEIGCGSGCASSF-LKSG---ILKNKPIVHFMSDISNSACRASKITALNN 96
Query: 223 VQIVGLSWGL-------FLSEIHNLQPVDLLLASDCFYEPTQFEEVLSTVA 354
++ GL FL I VD+L+ + Y PT+FEE+ S A
Sbjct: 97 RELYKDDNGLFITVQTSFLDGIRLGNGVDILIFNPP-YVPTEFEEIPSEAA 146
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 110 KIPGKPVPQPSS 75
K P KPVPQPSS
Sbjct: 321 KEPAKPVPQPSS 332
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,474,869
Number of Sequences: 5004
Number of extensions: 47527
Number of successful extensions: 174
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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