Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_K11
         (115 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   2.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   7.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    18   9.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    18   9.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 58  TLSLQLTTVEINNIKIILV 2
           TLS+QL + E+N   ++ +
Sbjct: 185 TLSVQLLSCEVNGSTLVYI 203


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 24  FISTVVSCNDKV*RNL 71
           F+S  V C D++  NL
Sbjct: 109 FLSVAVYCRDRLNPNL 124


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 44  ADYSRDK*YKNY 9
           A+Y R   YKNY
Sbjct: 363 ANYDRGVFYKNY 374


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 44  ADYSRDK*YKNY 9
           A+Y R   YKNY
Sbjct: 453 ANYDRGVFYKNY 464


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,805
Number of Sequences: 438
Number of extensions: 211
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)