Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_K10
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 320 8e-88
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 315 2e-86
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 314 3e-86
01_05_0710 + 24492337-24493053 31 0.99
01_01_1101 + 8731427-8732938 29 2.3
10_01_0099 - 1202668-1203023,1203097-1206037 29 3.0
01_05_0674 - 24187820-24188713,24188809-24189204 29 3.0
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 29 4.0
10_08_0510 + 18430580-18431781,18433176-18433554 29 4.0
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 29 4.0
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 4.0
04_01_0393 - 5154558-5154857,5155008-5155072,5158734-5159047,515... 28 5.3
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 28 5.3
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 27 9.2
04_04_0950 + 29609484-29611025 27 9.2
02_04_0395 + 22590097-22590343,22590566-22590921 27 9.2
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 27 9.2
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 320 bits (785), Expect = 8e-88
Identities = 142/205 (69%), Positives = 169/205 (82%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+
Sbjct: 22 KKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISIL 81
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+KLC
Sbjct: 82 MQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCK 141
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR V G K +P+L T+DGRT+RYPDPLIK ND++++D+ TNKI+DFIKFD GN+ M+TG
Sbjct: 142 VRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTG 201
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
GRN GRVG I SRE+H GSF+ +HV
Sbjct: 202 GRNTGRVGVIKSREKHKGSFETIHV 226
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 315 bits (774), Expect = 2e-86
Identities = 138/205 (67%), Positives = 169/205 (82%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISIL 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLC
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR V G K +PYL T+DGRT+RYPDPLIK ND++++D+ TNKI+DFIKFD GN+ M+TG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
GRN GRVG I +RE+H GSF+ +HV
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHV 210
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 314 bits (772), Expect = 3e-86
Identities = 137/205 (66%), Positives = 169/205 (82%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISIL 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLC
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR V G K +PYL T+DGRT+RYPDP+IK ND++++D+ TNKI+DFIKFD GN+ M+TG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
GRN GRVG I +RE+H GSF+ +HV
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHV 210
>01_05_0710 + 24492337-24493053
Length = 238
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = -3
Query: 555 LPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATR 376
L P +RLP S L L M + T +F L++ + +RPS + LLG + +R
Sbjct: 76 LLPGSTERLPFSPLAAH---LASMPTLTPAFALLTAIRHHPLRPSPLPLATPLLGHLLSR 132
Query: 375 RTLHSLYLASSGVIRWI 325
R ++ V+RW+
Sbjct: 133 RRARE----AASVVRWL 145
>01_01_1101 + 8731427-8732938
Length = 503
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 181 KHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAAQLVQ--HP 47
+HL+ L P H R A A L+ + R P R HAA LV+ HP
Sbjct: 29 RHLLQAHAYLLPRGGHRHARVASALLLASLRLPLRDHAAALVRRVHP 75
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 431 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 547
T R PD + ++ LD+S N + I GNL MIT
Sbjct: 123 TGRMPDEISELQRLTMLDLSYNNLTGHIPASVGNLTMIT 161
>01_05_0674 - 24187820-24188713,24188809-24189204
Length = 429
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 373 AARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQD 501
AA R P A A AP P P+HQ ++ +RH D
Sbjct: 149 AANRRAPAAAAKHRPAADQFAPPPAPSHQWAKIKRSRHATDHD 191
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 451 AHQGERLGAARHLHQQDHGLHQVR--LRQPLH 540
A QGE GAAR +HQ+ G R +RQ LH
Sbjct: 399 AAQGELAGAARQVHQRRRGRRGQRGHVRQELH 430
>10_08_0510 + 18430580-18431781,18433176-18433554
Length = 526
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 504 MILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTLHSLY 355
M L + CTE+ + R ++P +T YGTLL AT+ L ++
Sbjct: 193 MDYLCKNGRCTEARKIFDSMTKRGLKPD-ITTYGTLLQGYATKGALVEMH 241
>10_08_0509 +
18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 504 MILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTLHSLY 355
M L + CTE+ + R ++P +T YGTLL AT+ L ++
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPE-ITTYGTLLQGYATKGALVEMH 359
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAP--VPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRR 552
++R ++R P D+RR H P PG + + A + L + V R R P+ + +R
Sbjct: 375 KERERDRKHPADSRREHTPPRTPGDRRRSSSVRAEKPLRRPSPRRDAVHRHRSPVKEIKR 434
Query: 553 Q 555
+
Sbjct: 435 E 435
>04_01_0393 -
5154558-5154857,5155008-5155072,5158734-5159047,
5159148-5159338
Length = 289
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 485 ISTNKIMD-FIKFDSGNLCMITGGRNLGRVGTIVSRERH-PG-SFDIVHV 625
I NK++D F FD + + GG G + I+SR +H G +FD+ HV
Sbjct: 111 IVINKLLDRFHGFDGVGVLVDVGGGTGGTLEMIMSRHKHITGVNFDLPHV 160
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 302 YDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPD 448
+ V G T ITP EA N+ T + P +++H+G + YPD
Sbjct: 321 FSVDGVLTDFPITPSEAIGCFSNLNNSKTD-NAKPLIISHNGASGDYPD 368
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = -3
Query: 570 TRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTL 457
++PR PP++ +R P+++L + ++ L + SS + SF++
Sbjct: 22 SQPRSPPPLLARRPPKTSLSQQLLRL-DASSSSSSFSV 58
>04_04_0950 + 29609484-29611025
Length = 513
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 195 CFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTP 67
CF + + V+ + R +RK + K + L GP +G Y P
Sbjct: 468 CFLAVLVAFAVAWAVRRRQRKAAAEKPADGLLGPTKGSALYDP 510
>02_04_0395 + 22590097-22590343,22590566-22590921
Length = 200
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 404 ARSWGRSRRAAHCTACTWLLQV*YGG 327
ARSW RSRR H W L GG
Sbjct: 47 ARSWIRSRRRGHGVGEAWALAAATGG 72
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 290 FRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGP 394
+ LIYD++G + + P++A L + V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,188
Number of Sequences: 37544
Number of extensions: 393666
Number of successful extensions: 1533
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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