Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_K10
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 360 2e-99
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 360 2e-99
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 360 2e-99
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 360 2e-99
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 360 2e-99
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 360 2e-99
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 360 2e-99
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 358 8e-99
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 352 7e-97
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 352 7e-97
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 352 7e-97
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 352 7e-97
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 352 7e-97
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 349 5e-96
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 335 6e-92
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 334 1e-91
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 331 1e-90
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 102 1e-21
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.63
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 1.1
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.4
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.3
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 31 4.4
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 31 4.4
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 4.4
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 31 4.4
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 31 4.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.4
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 31 4.4
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.4
U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosyl... 30 5.8
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 30 5.8
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 5.8
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 30 5.8
AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA glycos... 30 5.8
AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein. 30 5.8
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 360 bits (886), Expect = 2e-99
Identities = 159/205 (77%), Positives = 181/205 (88%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 358 bits (881), Expect = 8e-99
Identities = 158/205 (77%), Positives = 180/205 (87%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGR+G I +RERHPGSFD+VHV
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHV 210
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 352 bits (865), Expect = 7e-97
Identities = 155/205 (75%), Positives = 179/205 (87%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGSFD+VHV
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHV 210
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 352 bits (865), Expect = 7e-97
Identities = 155/205 (75%), Positives = 179/205 (87%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 5 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 64
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 124
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ G
Sbjct: 125 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 184
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGSFD+VHV
Sbjct: 185 GANLGRVGVITNRERHPGSFDVVHV 209
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 352 bits (865), Expect = 7e-97
Identities = 155/205 (75%), Positives = 179/205 (87%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGSFD+VHV
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHV 210
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 352 bits (865), Expect = 7e-97
Identities = 155/205 (75%), Positives = 179/205 (87%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGSFD+VHV
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHV 210
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 352 bits (865), Expect = 7e-97
Identities = 155/205 (75%), Positives = 179/205 (87%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGSFD+VHV
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHV 210
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 349 bits (858), Expect = 5e-96
Identities = 154/205 (75%), Positives = 178/205 (86%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGSF +VHV
Sbjct: 186 GANLGRVGVITNRERHPGSFGVVHV 210
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 335 bits (824), Expect = 6e-92
Identities = 148/205 (72%), Positives = 173/205 (84%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 190
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKIC 65
Query: 191 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCN 370
Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLC
Sbjct: 66 MQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCK 125
Query: 371 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITG 550
VR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+CM+
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIA 185
Query: 551 GRNLGRVGTIVSRERHPGSFDIVHV 625
G NLGRVG I +RERHPGS D+VHV
Sbjct: 186 GANLGRVGVITNRERHPGSCDVVHV 210
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 334 bits (821), Expect = 1e-91
Identities = 147/190 (77%), Positives = 168/190 (88%)
Frame = +2
Query: 56 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 235
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 236 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLV 415
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 416 THDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRER 595
THD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 596 HPGSFDIVHV 625
HPGSFD+VHV
Sbjct: 181 HPGSFDVVHV 190
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 331 bits (814), Expect = 1e-90
Identities = 148/192 (77%), Positives = 169/192 (88%)
Frame = +2
Query: 50 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 229
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 230 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPY 409
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 410 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSR 589
LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 590 ERHPGSFDIVHV 625
ERHPGSFD+VHV
Sbjct: 180 ERHPGSFDVVHV 191
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 102 bits (244), Expect = 1e-21
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +2
Query: 11 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 163
KKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 466 RLGAARHLHQQDHGLHQVRLRQPLHDHR 549
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 475 AARHLHQQDHGLHQVRLRQPLHDHR 549
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 236 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRV 382
+YPA + D I + E+FRL+ + + RI + K C++ RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 483
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 236 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRV 382
+YPA + D I + E+FRL+ + + +I + K C++ RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 498
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 498
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 388 RPQERAVPGDARRAHAPVPGPAHQG 462
R + PG ARR A VPGPA +G
Sbjct: 257 RLSPESAPGPARRGRASVPGPARRG 281
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 498
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 498
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 77 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 244
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 245 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 337
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 382 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 498
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 77 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 244
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 245 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 337
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosylase
protein.
Length = 351
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 123 GKHSRSLWGPVEGRGAYTPPSL 58
G RSLWGP G TPPSL
Sbjct: 300 GNFFRSLWGPYAGWAQATPPSL 321
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 344 EEAKYKLCNVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 511
E+A +C++ R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 512 IKFDSGNLCMITGGRNLGRV 571
K D +LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 30.3 bits (65), Expect = 5.8
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 227 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATG 391
++ TY +GF+ D I + N F + T+ ++PE++ LC+V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 344 EEAKYKLCNVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 511
E+A +C++ R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 512 IKFDSGNLCMITGGRNLGRV 571
K D +LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA
glycosylase protein.
Length = 341
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 123 GKHSRSLWGPVEGRGAYTPPSL 58
G RSLWGP G TPPSL
Sbjct: 290 GNFFRSLWGPYAGWAQATPPSL 311
>AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein.
Length = 2992
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 344 EEAKYKLCNVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 511
E+A +C++ R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 1383 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 1442
Query: 512 IKFDSGNLCMITGGRNLGRV 571
K D +LC+ G +NL V
Sbjct: 1443 -KMDLASLCLKAGVKNLNTV 1461
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,735,771
Number of Sequences: 237096
Number of extensions: 2084868
Number of successful extensions: 16350
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 16058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16349
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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