Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_K05
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   0.93 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   3.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   6.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 199 FVDYPISMTIYMHSKIFTLTQHV-QRTTSIRNTAIKCYKLY 80
           F    +++  + H+    +  H+ Q+TT    T ++CYK Y
Sbjct: 287 FAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYY 327


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 302 EVSPCCTIYNNY*WFIIEYSQLENM 228
           E+SP   + N   W I+ +S+  N+
Sbjct: 76  EISPAMLLDNGIPWVILGHSERRNI 100


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 267 LMVHNRVLSARKYGIHLNKINKSLLTTQF 181
           L+  NR +++  Y  HL K+N ++   +F
Sbjct: 83  LLPPNRTINSVVYIEHLTKLNNAIEEKRF 111


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 402 FRAGDRGLWSCDPNLWRRAV 461
           F   ++G  SC PN++ R V
Sbjct: 63  FPVHEKGGASCGPNVYNRGV 82


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 382  LQHRPPHRSLGF*MLAENSSLP 317
            LQH PP  S G   + +   LP
Sbjct: 1265 LQHAPPAYSCGTVSVPQQQQLP 1286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,602
Number of Sequences: 438
Number of extensions: 2731
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)