Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_K02
         (226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   1.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   1.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   5.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          19   5.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   5.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   7.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   9.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   9.9  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKHRQR 140
           +QR+  C +R   S+H  R
Sbjct: 224 FQRTSSCHSRYEDSRHEDR 242


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKHRQR 140
           +QR+  C +R   S+H  R
Sbjct: 224 FQRTSSCHSRYEDSRHEDR 242


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKHRQR 140
           +QR+  C +R   S+H  R
Sbjct: 224 FQRTSSCHSRYEDSRHEDR 242


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKHRQR 140
           +QR+  C +R   S+H  R
Sbjct: 224 FQRTSSCHSRYEDSRHEDR 242


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKHRQR 140
           +QR+  C +R   S+H  R
Sbjct: 224 FQRTSSCHSRYEDSRHEDR 242


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKHRQR 140
           +QR+  C +R   S+H  R
Sbjct: 224 FQRTSSCHSRYEDSRHEDR 242


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 21  KSCGKRLQNEQTFDYIPGRLLYQ 89
           + CG   +N QT    P R  +Q
Sbjct: 399 QGCGAGKENYQTMSRDPARTPFQ 421


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 84  YQRSRFCETRRRSSKH 131
           +QR+  C +R   S+H
Sbjct: 224 FQRTSSCHSRYEDSRH 239


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 21  KSCGKRLQNEQTFDYIPGRLLYQ 89
           + CG   +N QT    P R  +Q
Sbjct: 399 QGCGAGKENYQTMSRDPARTPFQ 421


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 108 FHKSVNADKADGQEYNQMFVHFEVSSHNFSYEQP 7
           FH ++NADK   +   ++F+  +  SH+   E P
Sbjct: 502 FHITINADK-PMKAAIRIFIGPKYDSHHKLIEIP 534


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 108 FHKSVNADKADGQEYNQMFVHFEVSSHNFSYEQP 7
           FH ++NADK   +   ++F+  +  SH+   E P
Sbjct: 502 FHITINADK-PMKAAIRIFIGPKYDSHHKLIEIP 534


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -2

Query: 138 VAGACCFGVAFHKSVN 91
           V G+C FG+      N
Sbjct: 185 VIGSCAFGIDMSSMTN 200


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 58  LIIFLAVCFISVH 96
           L I++ VC ++VH
Sbjct: 325 LSIWITVCVLNVH 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,879
Number of Sequences: 438
Number of extensions: 774
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)