Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_K01
(491 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 2.3
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 2.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 2.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 3.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 3.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 3.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 3.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 3.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 3.1
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 7.1
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 9.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.4
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 9.4
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 429 AGYRTSSGSITYHCGGL 479
+G T++G + Y CGG+
Sbjct: 18 SGKSTTTGHLIYKCGGI 34
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 2.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 321 KILYQLHRVSVELTPDGNRIYGGQFTDLGEFPWV 422
K+ Y+ + +++E P IY G F PW+
Sbjct: 103 KLYYKNYIINIEQIPVPVPIYCGNFPPRPMGPWI 136
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 2.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 321 KILYQLHRVSVELTPDGNRIYGGQFTDLGEFPWV 422
K+ Y+ + +++E P IY G F PW+
Sbjct: 344 KLYYKNYIINIEQIPVPVPIYCGNFPPRPMGPWI 377
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 429 AGYRTSSGSITYHCGGL 479
+G T++G + Y CGG+
Sbjct: 18 SGKSTTTGHLIYKCGGI 34
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 357 LTPDGNRIYGGQFT-DLGEFPWVVLAGYRTSS 449
+ P N+IYGGQF DL P V ++ +S+
Sbjct: 80 IAPYLNQIYGGQFVRDLIWTPTVYVSNEPSSA 111
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 321 KILYQLHRVSVELTPDGNRIYGGQFTDLGEFPWV 422
K LY+ + +++E P +Y G F PW+
Sbjct: 114 KKLYKNYIINIEQIPVPVPVYYGNFPPRPMGPWI 147
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 463 YVIDPEEVRYPAKTTHGNSP 404
Y+I+ E++ P +GN P
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 321 KILYQLHRVSVELTPDGNRIYGGQFTDLGEFPWV 422
K LY+ + +++E P +Y G F PW+
Sbjct: 114 KKLYKNYIINIEQIPVPVPVYYGNFPPRPMGPWI 147
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 463 YVIDPEEVRYPAKTTHGNSP 404
Y+I+ E++ P +GN P
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +3
Query: 321 KILYQLHRVSVELTPDGNRIYGGQFTDLGEFPWV 422
K+ Y+ + +++E P +Y G F PW+
Sbjct: 114 KLYYKNYIINIEQIPVPVPVYYGNFPPRPMGPWI 147
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 463 YVIDPEEVRYPAKTTHGNSP 404
Y+I+ E++ P +GN P
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +3
Query: 321 KILYQLHRVSVELTPDGNRIYGGQFTDLGEFPWV 422
K+ Y+ + +++E P +Y G F PW+
Sbjct: 339 KLYYKNYIINIEQIPVPVPVYYGNFPPRPMGPWI 372
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 463 YVIDPEEVRYPAKTTHGNSP 404
Y+I+ E++ P +GN P
Sbjct: 345 YIINIEQIPVPVPVYYGNFP 364
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 3.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 189 KTTLRLPEETDDATLKRSLIKSRYKFRATVQRDTIA*SRPVV 64
K L+ P D +L K KFRA Q+D+ A + P V
Sbjct: 622 KRVLQAPPLYDTNSLMDEAYKPHKKFRALRQKDS-AEAEPAV 662
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 284 NYTQGGEDPVYDEDSLPAPSSQCGIDT 364
NY GE ++ P+P+ QC T
Sbjct: 729 NYIMRGEASPRSPNASPSPAEQCASTT 755
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +3
Query: 342 RVSVELTPDGNRIYGGQFTDLGEFPW 419
R+ T GN+ Y D G F W
Sbjct: 42 RIHTVRTRGGNKKYRALRLDTGNFSW 67
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +2
Query: 401 FRRVSMGGFSWISYFFWIYNIPLW 472
F R + + Y W+Y +PL+
Sbjct: 207 FNRGLLSASYLVCYGIWVYFVPLF 230
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 128 KAVISSEQLYSETQLLSRAQWCHT 57
K ISS L S ++ R CH+
Sbjct: 209 KYAISSNSLRSRSRSFQRTSSCHS 232
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +2
Query: 401 FRRVSMGGFSWISYFFWIYNIPLW 472
F R + + Y W+Y +PL+
Sbjct: 83 FNRGLLSASYLVCYGIWVYFVPLF 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,246
Number of Sequences: 438
Number of extensions: 2901
Number of successful extensions: 25
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -