Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_J24
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-13|CAA86748.1| 281|Caenorhabditis elegans Hypothetical p... 151 3e-37
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 33 0.15
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 30 1.1
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z77660-1|CAB01175.1| 162|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z46787-13|CAA86748.1| 281|Caenorhabditis elegans Hypothetical
protein C16C10.10 protein.
Length = 281
Score = 151 bits (367), Expect = 3e-37
Identities = 74/156 (47%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Frame = +2
Query: 128 INGRALHFVFKVADRTLTAKFYRDVLGMKVLRHEEFTEGCEATCNGPYANRWSKTMVGYG 307
+ RALH+VFKVA+R T F+ +VL MKVLRHEEF +GCEATCNGPY RWSKTM+GYG
Sbjct: 1 MTARALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYG 60
Query: 308 PEDSHFVVELTYNYGVTHYDQGNDFLGLTLQSSESLKRAAANNWPVKEQNGLKYVEAPGG 487
ED HFV+E+TYNY + Y+ GND+ + + S + ++ N K G V+ P G
Sbjct: 61 SEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-KSGCGRLAVKDPDG 119
Query: 488 YKFYII*QPQPVDRDP-VVKVSLASSNLARSIAYWN 592
++F I D+ P V++V + +L +S YWN
Sbjct: 120 HEFKI----GKADQSPKVLRVQVNVGDLEKSKKYWN 151
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 320 HFVVELTYNYGVTHYDQGNDFLGLTLQSSESLKRAAANNWPVKEQN 457
H +++L +N H D GND++ +SSE ++A N +E++
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGNQENQEEED 1459
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 320 HFVVELTYNYGVTHYDQGNDFLGLTLQSSESLKRAAANNWPVKEQN 457
H +++L +N H D GND++ +SSE ++A N +E++
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGNQENQEEED 1459
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 320 HFVVELTYNYGVTHYDQGNDFLGLTLQSSESLKRAAANNWPVKEQN 457
H +++L +N H D GND++ +SSE ++A N +E++
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGNQENQEEED 1459
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 215 VLRHEEFTEGCEATCNGPYANRW-SKTMVGYGPEDSHFVVELT-YNYGVTHYDQGNDFLG 388
+LR E E C+ TC+ +AN W + V +G + + +++T G Y+ + F G
Sbjct: 307 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQITEEGVGNLTYNGVDPFFG 366
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 215 VLRHEEFTEGCEATCNGPYANRW-SKTMVGYGPEDSHFVVELT-YNYGVTHYDQGNDFLG 388
+LR E E C+ TC+ +AN W + V +G + + +++T G Y+ + F G
Sbjct: 309 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQITEEGVGNLTYNGVDPFFG 368
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 263 GPYANRWSKTMVGYGPEDSHFVVELTYNYG--VTHYDQGNDFLGLTLQSSESLKRAAANN 436
GP N WSK++ G + V ++ G D DF G+ +S SL A N
Sbjct: 766 GPIGNEWSKSITVQGGKTLEACVVRAWSRGKNPVDVDMTIDFFGVKKPTSISLIHGATNT 825
Query: 437 WPVKEQ 454
P++ Q
Sbjct: 826 -PIRFQ 830
>Z77660-1|CAB01175.1| 162|Caenorhabditis elegans Hypothetical
protein F38H4.1 protein.
Length = 162
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 317 SHFVVELTYNYGVTHYDQGNDFLGLTLQSSESL 415
SHF+V L +NYG + N L L L S S+
Sbjct: 82 SHFLVSLRFNYGPLTDRESNRELFLNLSRSRSV 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,369,424
Number of Sequences: 27780
Number of extensions: 317523
Number of successful extensions: 660
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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