Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_J23
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M91670-1|AAA58446.1|  225|Homo sapiens ubiquitin carrier protein...    36   0.064
DQ120718-1|ABC40675.1|  222|Homo sapiens rcUBE2S protein.              36   0.064
BC066948-1|AAH66948.1|  222|Homo sapiens UBE2S protein protein.        36   0.064
BC065364-1|AAH65364.1|  222|Homo sapiens ubiquitin-conjugating e...    36   0.064
BC007554-1|AAH07554.1|  222|Homo sapiens ubiquitin-conjugating e...    36   0.064
BC004236-1|AAH04236.1|  222|Homo sapiens ubiquitin-conjugating e...    36   0.064
AB062397-1|BAB93484.1|  222|Homo sapiens ubiquitin carrier prote...    36   0.064
Y09267-1|CAA70462.1|  471|Homo sapiens flavin-containing monooxy...    29   9.8  
BT006979-1|AAP35625.1|  471|Homo sapiens flavin containing monoo...    29   9.8  
BC005894-1|AAH05894.1|  471|Homo sapiens flavin containing monoo...    29   9.8  
AY916056-1|AAW82431.1|  472|Homo sapiens flavin containing monoo...    29   9.8  
AL021026-3|CAA15910.1|  471|Homo sapiens flavin containing monoo...    29   9.8  

>M91670-1|AAA58446.1|  225|Homo sapiens ubiquitin carrier protein
           protein.
          Length = 225

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>DQ120718-1|ABC40675.1|  222|Homo sapiens rcUBE2S protein.
          Length = 222

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>BC066948-1|AAH66948.1|  222|Homo sapiens UBE2S protein protein.
          Length = 222

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>BC065364-1|AAH65364.1|  222|Homo sapiens ubiquitin-conjugating
           enzyme E2S protein.
          Length = 222

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>BC007554-1|AAH07554.1|  222|Homo sapiens ubiquitin-conjugating
           enzyme E2S protein.
          Length = 222

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>BC004236-1|AAH04236.1|  222|Homo sapiens ubiquitin-conjugating
           enzyme E2S protein.
          Length = 222

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>AB062397-1|BAB93484.1|  222|Homo sapiens ubiquitin carrier protein
           protein.
          Length = 222

 Score = 36.3 bits (80), Expect = 0.064
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 426 DDLLDLYVFMF-PAETPYAGGTFRVRLVLGRE 518
           +DL DL V +  P  TPYAGG FR++L+LG++
Sbjct: 38  EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 69


>Y09267-1|CAA70462.1|  471|Homo sapiens flavin-containing
           monooxygenase 2 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 378 YHFSVGFLNRSLRRICDDLLDLYVFMFPA 464
           Y FS  FL  SL ++ ++++ LY ++FPA
Sbjct: 331 YSFSFPFLEDSLVKVENNMVSLYKYIFPA 359


>BT006979-1|AAP35625.1|  471|Homo sapiens flavin containing
           monooxygenase 2 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 378 YHFSVGFLNRSLRRICDDLLDLYVFMFPA 464
           Y FS  FL  SL ++ ++++ LY ++FPA
Sbjct: 331 YSFSFPFLEDSLVKVENNMVSLYKYIFPA 359


>BC005894-1|AAH05894.1|  471|Homo sapiens flavin containing
           monooxygenase 2 (non-functional) protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 378 YHFSVGFLNRSLRRICDDLLDLYVFMFPA 464
           Y FS  FL  SL ++ ++++ LY ++FPA
Sbjct: 331 YSFSFPFLEDSLVKVENNMVSLYKYIFPA 359


>AY916056-1|AAW82431.1|  472|Homo sapiens flavin containing
           monooxygenase 2 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 378 YHFSVGFLNRSLRRICDDLLDLYVFMFPA 464
           Y FS  FL  SL ++ ++++ LY ++FPA
Sbjct: 332 YSFSFPFLEDSLVKVENNMVSLYKYIFPA 360


>AL021026-3|CAA15910.1|  471|Homo sapiens flavin containing
           monooxygenase 2 (non-functional) protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 378 YHFSVGFLNRSLRRICDDLLDLYVFMFPA 464
           Y FS  FL  SL ++ ++++ LY ++FPA
Sbjct: 331 YSFSFPFLEDSLVKVENNMVSLYKYIFPA 359


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,517,495
Number of Sequences: 237096
Number of extensions: 1484989
Number of successful extensions: 2520
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2520
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)