Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_J21
         (397 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007337-1|AAH07337.1|  339|Homo sapiens dehydrogenase/reductase...    29   7.4  
BC000637-1|AAH00637.1|  339|Homo sapiens dehydrogenase/reductase...    29   7.4  
AY359031-1|AAQ89390.1|  289|Homo sapiens oxidoreductase/S-2 H pr...    29   7.4  
AF151844-1|AAD34081.1|  339|Homo sapiens CGI-86 protein protein.       29   7.4  
AF126782-1|AAF06941.1|  289|Homo sapiens retinal short-chain deh...    29   7.4  

>BC007337-1|AAH07337.1|  339|Homo sapiens dehydrogenase/reductase
           (SDR family) member 7 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  TNDNNEKRVETIKEQPGAVNSYFVYFLMKHE 177
           TN   +KR+E  K    A +SYF  F  KH+
Sbjct: 309 TNKMGKKRIENFKSGVDADSSYFKIFKTKHD 339


>BC000637-1|AAH00637.1|  339|Homo sapiens dehydrogenase/reductase
           (SDR family) member 7 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  TNDNNEKRVETIKEQPGAVNSYFVYFLMKHE 177
           TN   +KR+E  K    A +SYF  F  KH+
Sbjct: 309 TNKMGKKRIENFKSGVDADSSYFKIFKTKHD 339


>AY359031-1|AAQ89390.1|  289|Homo sapiens oxidoreductase/S-2 H
           protein.
          Length = 289

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  TNDNNEKRVETIKEQPGAVNSYFVYFLMKHE 177
           TN   +KR+E  K    A +SYF  F  KH+
Sbjct: 259 TNKMGKKRIENFKSGVDADSSYFKIFKTKHD 289


>AF151844-1|AAD34081.1|  339|Homo sapiens CGI-86 protein protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  TNDNNEKRVETIKEQPGAVNSYFVYFLMKHE 177
           TN   +KR+E  K    A +SYF  F  KH+
Sbjct: 309 TNKMGKKRIENFKSGVDADSSYFKIFKTKHD 339


>AF126782-1|AAF06941.1|  289|Homo sapiens retinal short-chain
           dehydrogenase/reductase retSDR4 protein.
          Length = 289

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 85  TNDNNEKRVETIKEQPGAVNSYFVYFLMKHE 177
           TN   +KR+E  K    A +SYF  F  KH+
Sbjct: 259 TNKMGKKRIENFKSGVDADSSYFKIFKTKHD 289


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,368,544
Number of Sequences: 237096
Number of extensions: 626189
Number of successful extensions: 731
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)