Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_J16
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    22   4.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.7  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.9  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   9.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.9  

>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 371 LLSVEAMNTLLPSSCQATSNMGPSILCTALGTVFPDP 261
           L S   +  ++PS C+A SN   S+   +   V P+P
Sbjct: 16  LFSFVVILLIIPSKCEAVSNDRQSLEARSADLV-PEP 51


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 576 MSTVTSFWQIQTEDGHRTSSVPKL 505
           M  +  FW  +  DG R  +VP L
Sbjct: 212 MKNIMKFWLDKGIDGFRIDAVPHL 235


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 510 LGHSKCGAHPQSESARTML 566
           LG +  G HP   SAR ML
Sbjct: 566 LGSALGGWHPSDRSARLML 584


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 568 CAHVEYPMAAVGTADRGICLY 630
           C  +E+P+   G    G CL+
Sbjct: 123 CYKLEHPVTGCGERTEGRCLH 143


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 568 CAHVEYPMAAVGTADRGICLY 630
           C  +E+P+   G    G CL+
Sbjct: 128 CYKLEHPVTGCGERTEGRCLH 148


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 371 LLSVEAMNTLLPSSCQATSN 312
           L S   +  ++PS C+A SN
Sbjct: 16  LFSFVVILLIIPSKCEAVSN 35


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 568 CAHVEYPMAAVGTADRGICLY 630
           C  +E+P+   G    G CL+
Sbjct: 128 CYKLEHPVTGCGERTEGRCLH 148


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 275 VFPDPSTSQHRT*QSQLPAIRNVWGIDAGENSKAETVSSGGELTSR 138
           + PD  T+  +T   +L  I   +GI     +K E ++ GG +  R
Sbjct: 35  IMPDILTAIGQTPLIKLNNIPKSYGIKCEIYAKCEFLNPGGSVKDR 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,173
Number of Sequences: 438
Number of extensions: 5056
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)