Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_J14
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 189 1e-48
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 189 1e-48
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical ... 32 0.32
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 0.43
U40797-9|AAK95870.1| 349|Caenorhabditis elegans Hypothetical pr... 31 0.57
AF077531-2|AAC64613.2| 279|Caenorhabditis elegans Hypothetical ... 31 0.57
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 31 0.75
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 1.7
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 1.7
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 1.7
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.3
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.3
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical pr... 28 5.3
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 28 5.3
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 28 5.3
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 7.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 27 7.0
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 27 7.0
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 7.0
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 7.0
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 7.0
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 7.0
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ... 27 7.0
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z69793-1|CAA93670.1| 126|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80024-8|AAK18887.3| 288|Caenorhabditis elegans Serpentine rece... 27 9.2
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 9.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 9.2
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 9.2
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 189 bits (460), Expect = 1e-48
Identities = 94/174 (54%), Positives = 121/174 (69%)
Frame = +2
Query: 11 LRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQ 190
+RLR LEK+LL ALN++KGKILDD+SVI TLE LK EA ++ QK ETDKV+AE++ VS
Sbjct: 3683 VRLRHLEKALLAALNESKGKILDDNSVIETLEKLKNEAAEVAQKSAETDKVMAEVDAVSA 3742
Query: 191 QYLPLSQACSSIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCSLLNGVTDYTARLKIIT 370
QY LS ACS IY T+ LN++HFLY YSL ++IF+ VL L+ TDY RL+IIT
Sbjct: 3743 QYQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKTPELSSTTDYAKRLRIIT 3802
Query: 371 EELFSVVYERVGRGMLHTDRLTFALLLCRIHLKGMGAEDTLERSFGVTFAGKRD 532
LF V+ RV RGMLHTD++ ALLL RIH++ + E+ F + G+ D
Sbjct: 3803 TSLFQTVFRRVSRGMLHTDKVLLALLLMRIHIRSNPSAPAYEQHFDL-LLGRSD 3855
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 189 bits (460), Expect = 1e-48
Identities = 94/174 (54%), Positives = 121/174 (69%)
Frame = +2
Query: 11 LRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQ 190
+RLR LEK+LL ALN++KGKILDD+SVI TLE LK EA ++ QK ETDKV+AE++ VS
Sbjct: 3683 VRLRHLEKALLAALNESKGKILDDNSVIETLEKLKNEAAEVAQKSAETDKVMAEVDAVSA 3742
Query: 191 QYLPLSQACSSIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCSLLNGVTDYTARLKIIT 370
QY LS ACS IY T+ LN++HFLY YSL ++IF+ VL L+ TDY RL+IIT
Sbjct: 3743 QYQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKTPELSSTTDYAKRLRIIT 3802
Query: 371 EELFSVVYERVGRGMLHTDRLTFALLLCRIHLKGMGAEDTLERSFGVTFAGKRD 532
LF V+ RV RGMLHTD++ ALLL RIH++ + E+ F + G+ D
Sbjct: 3803 TSLFQTVFRRVSRGMLHTDKVLLALLLMRIHIRSNPSAPAYEQHFDL-LLGRSD 3855
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/145 (26%), Positives = 80/145 (55%)
Frame = +2
Query: 11 LRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQ 190
L L LE+ LLQ L ++G +L++ +++ +L K+ A+ I + + E++++ E+ T
Sbjct: 3325 LELEGLEQLLLQQLASSQGNLLENTALLDSLNKSKESAEIITKSIVESEQLHKELTTQKD 3384
Query: 191 QYLPLSQACSSIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCSLLNGVTDYTARLKIIT 370
Y+PLS SS++F+ +L + +Y YS+ + +F ++ + + R++ +
Sbjct: 3385 IYVPLSLFTSSLFFSFSNLQFHNPMYNYSVNTIMHLFGK----TIKSCEDKSSTRVETLA 3440
Query: 371 EELFSVVYERVGRGMLHTDRLTFAL 445
++ V+ + RG+ DRL FA+
Sbjct: 3441 RQMQLTVFYHISRGIFRQDRLMFAV 3465
>AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical
protein Y105E8B.3 protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 17 LRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQY 196
L E+ L + G+ DD ++E +++E +D+ + EE A+ TV QQ
Sbjct: 323 LAHCEQELRNRQEEDLGEDEDDSDDSKSMEDIQEEPEDLEKDHEELQ---AQENTVKQQK 379
Query: 197 LPLSQACSSIYFTMDSLNQVHFLYQYSLK 283
+ LSQ + D+ NQ+ + +LK
Sbjct: 380 IVLSQTTRFTDWLSDATNQLEAVDLDALK 408
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVS 187
D+ Q LND ++ D+ + + + E DDI + ++ TD + ++T++
Sbjct: 3716 DVDAEQTRHQYDDVLNDVAAELEDETLLKQSASQVANEIDDISKMIDSTDPERSILDTIA 3775
Query: 188 QQYLPLSQA 214
+ +P +A
Sbjct: 3776 KSDIPALKA 3784
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVS 187
D+ Q LND ++ D+ + + + E DDI + ++ TD + ++T++
Sbjct: 4670 DVDAEQTRHQYDDVLNDVAAELEDETLLKQSASQVANEIDDISKMIDSTDPERSILDTIA 4729
Query: 188 QQYLPLSQA 214
+ +P +A
Sbjct: 4730 KSDIPALKA 4738
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVS 187
D+ Q LND ++ D+ + + + E DDI + ++ TD + ++T++
Sbjct: 5573 DVDAEQTRHQYDDVLNDVAAELEDETLLKQSASQVANEIDDISKMIDSTDPERSILDTIA 5632
Query: 188 QQYLPLSQA 214
+ +P +A
Sbjct: 5633 KSDIPALKA 5641
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVS 187
D+ Q LND ++ D+ + + + E DDI + ++ TD + ++T++
Sbjct: 6476 DVDAEQTRHQYDDVLNDVAAELEDETLLKQSASQVANEIDDISKMIDSTDPERSILDTIA 6535
Query: 188 QQYLPLSQA 214
+ +P +A
Sbjct: 6536 KSDIPALKA 6544
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVS 187
D+ Q LND ++ D+ + + + E DDI + ++ TD + ++T++
Sbjct: 7379 DVDAEQTRHQYDDVLNDVAAELEDETLLKQSASQVANEIDDISKMIDSTDPERSILDTIA 7438
Query: 188 QQYLPLSQA 214
+ +P +A
Sbjct: 7439 KSDIPALKA 7447
>U40797-9|AAK95870.1| 349|Caenorhabditis elegans Hypothetical
protein C28C12.12 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 26 LEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQY 196
LEK L D + DDS+I+ ++ + +A++I K +V+A I T+ ++Y
Sbjct: 64 LEKLFLMLCGDTGKEYDSDDSIISEIDHM--DAEEIASKDARFREVLASINTMPKEY 118
>AF077531-2|AAC64613.2| 279|Caenorhabditis elegans Hypothetical
protein F13C5.3 protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.57
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +2
Query: 23 QLEKSLLQALNDAKGKILDD-DSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQYL 199
Q +++ L+DA K+LD I T + +K + + K A I TV +Y
Sbjct: 147 QAVEAISDELSDAPLKVLDTCHKDICTYDYMKNATFNPKTETYSYVKENALINTVHPRYS 206
Query: 200 PLSQACSSIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCSLLNGVTDYTARLKIITEEL 379
++ S YFT + + + +K LD + L SLL+ +T + + +EL
Sbjct: 207 LIAFQKSKPYFTFEKMKRKTATKIIDVKQNLDTKAKNLWSSLLD--QQFTLAIHVHNQEL 264
Query: 380 F 382
F
Sbjct: 265 F 265
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +2
Query: 17 LRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQY 196
L+ LEK ++ +ND++ I V++ L++ KE D I + + + + A+ Q++
Sbjct: 485 LKTLEKRAIEKINDSRSDIAQFLDVLSCLQS-NKELDKIQKNLSDLNSFRAD-----QKF 538
Query: 197 LPLSQACSSIYFTMDSLN 250
P+ A ++ SLN
Sbjct: 539 PPIVTAVEDALISVSSLN 556
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 41 LQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQY 196
L AL +K KI + V L+KE DDI +V++ K E E +++QY
Sbjct: 1214 LDALQKSKAKIEKEKGV------LQKELDDINAQVDQETKSRVEQERLAKQY 1259
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 41 LQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQY 196
L AL +K KI + V L+KE DDI +V++ K E E +++QY
Sbjct: 1214 LDALQKSKAKIEKEKGV------LQKELDDINAQVDQETKSRVEQERLAKQY 1259
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 41 LQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQY 196
L AL +K KI + V L+KE DDI +V++ K E E +++QY
Sbjct: 1214 LDALQKSKAKIEKEKGV------LQKELDDINAQVDQETKSRVEQERLAKQY 1259
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 92 IATLETLKKEADDIGQKVEETDKVIAEIETVSQQYLPLSQACSSIYFTMDSLNQV 256
+AT LK+E +++ +++ E+D VIA +E Y + I +S+ V
Sbjct: 101 MATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEVICQDNESIGNV 155
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 92 IATLETLKKEADDIGQKVEETDKVIAEIETVSQQYLPLSQACSSIYFTMDSLNQV 256
+AT LK+E +++ +++ E+D VIA +E Y + I +S+ V
Sbjct: 230 MATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEVICQDNESIGNV 284
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 28.3 bits (60), Expect = 4.0
Identities = 27/103 (26%), Positives = 43/103 (41%)
Frame = +2
Query: 14 RLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQ 193
R+ QLE + + N AKG+ LE +++ D+ + E V E+ T+S +
Sbjct: 70 RVEQLEAACFRYKNQAKGEFASSIKSEEKLEKSQRKDDEDNEYSNELQSV-QELRTISGE 128
Query: 194 YLPLSQACSSIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCS 322
QA Y + ++ Q KM DIF+ V S
Sbjct: 129 SQMAEQALD--YIVSKTFKKIPVSSQ---KMSRDIFNVCFVFS 166
>Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical
protein C49A1.1 protein.
Length = 246
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 5 EDLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
ED + R++ ND K K +D ++IA ET++++ + QK+ + +K
Sbjct: 116 EDGKKRRMAGVTWYLRNDEKSKNHEDYNMIAIYETIREKRFEEVQKIRKLEK 167
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 59 AKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQYLPLSQACSSIYFTM 238
A I D DS I + L+ ++ +V++ A +E +Q Y Q C+S+ +
Sbjct: 252 ASETIADQDSNIRQIRDLQTTVGELETQVQQVQNERAAVEQTAQNY---KQRCTSLQQEL 308
Query: 239 DS 244
D+
Sbjct: 309 DT 310
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/59 (22%), Positives = 34/59 (57%)
Frame = +2
Query: 17 LRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQ 193
+ +LEK L A N+ + + ++ATL T + D +G+ + E ++++ +++ + ++
Sbjct: 56 VEELEKKLASAENEIRVMESTNKELMATLATTR---DQLGKMLRERNQLVKDVDELHEE 111
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical protein
T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 17 LRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVE 148
L++L K++ + D + +DD + TLE KK +D++ + +E
Sbjct: 886 LKKLAKTIREESIDKEFCAAEDDEALKTLENGKKSSDELRRFLE 929
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 14 RLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQ 193
RL K LLQ DD + AT E L K D + ++ D+VI E + +Q
Sbjct: 835 RLFTKVKPLLQVTRTDDEIRAKDDELRATKERLLKMEHDFRENEKKLDQVIVERAVIQEQ 894
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 32 KSLLQALNDAKGKILDDDSV--IATLETLKKEADDIGQKVEETDKVIAEIE 178
KS+ +N+ K I DDD++ LKK +DI +VE +AE+E
Sbjct: 353 KSINDIVNELKD-IPDDDALKDFDKFYELKKSFEDISDRVESLKGFLAELE 402
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 8 DLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDK 160
D L +L K +L+A + + + + LET +K+AD++ +K+E K
Sbjct: 2290 DKALEKL-KGILEATEELEVDATNRAEIQEQLETTQKKADELERKIENVKK 2339
>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
protein F40E12.2 protein.
Length = 1251
Score = 27.5 bits (58), Expect = 7.0
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 32 KSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKVIAEIETVSQQYLPL-- 205
+ LL L D K DS + T+ + DD+ + + +E V++ +P+
Sbjct: 264 EKLLSRLKDLK------DSWVRTVLNKGMDLDDLKAYLVDFLTSANSLEKVNKDSVPMFN 317
Query: 206 SQACSSIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCSLLNGVTDY 346
S S+ +T+ +N + + + MFL F+S + DY
Sbjct: 318 SSVIESLDYTLALINSLRVIKKVPKDMFLTDFNSCFKVLSSTSIVDY 364
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 32 KSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKV 163
+S LQ +A G +DDSVI+ T+ +++ D VE+ + V
Sbjct: 1831 RSSLQLAMEAYGTATEDDSVISEAVTVGQKSVDQVDPVEQLEPV 1874
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 32 KSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKV 163
+S LQ +A G +DDSVI+ T+ +++ D VE+ + V
Sbjct: 1831 RSSLQLAMEAYGTATEDDSVISEAVTVGQKSVDQVDPVEQLEPV 1874
>Z69793-1|CAA93670.1| 126|Caenorhabditis elegans Hypothetical
protein R03A10.1 protein.
Length = 126
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 23 QLEKSLLQALNDAKGKI---LDDDSVIATLETLKKEADDIGQKVEETDKVIAEIE 178
+L + +L+ + D + + TL T K+ + Q ++ TDK++ EIE
Sbjct: 10 KLPQKILEIITDGSALLSIPMSSSQASETLLTSAKQFSHVEQVIDNTDKLLREIE 64
>U80024-8|AAK18887.3| 288|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 9 protein.
Length = 288
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 221 SIYFTMDSLNQVHFLYQYSLKMFLDIFSSVLVCSLLNGVTDYTARLKIITEELFSVVY 394
+IYF + + ++FLD+ SVL C+ + Y+ + + E+ F ++Y
Sbjct: 32 NIYFIKQIGRTRQKMILFFYRLFLDLAYSVLACAYMTFCILYSFFTEELREQQFFIIY 89
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -1
Query: 478 AHTLQVNATQQKREGKSVRVQHAAADALIHNRKQFFCDNFQPGGIVCYTIEQGTDEHGAE 299
A L+ AT +++ + R AA DA+ KQF D G + + AE
Sbjct: 2137 ARLLKTVATVEEKNQQGTRAVEAAVDAIGFEMKQFEHD-LNEGAAIPTDFRPEHLQQTAE 2195
Query: 298 YIEEHLQRVL 269
++ E +RV+
Sbjct: 2196 HVSEITKRVM 2205
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 32 KSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEETDKV 163
+S LQ +A G +DDSVI+ T+ +++ D VE+ + V
Sbjct: 1831 RSSLQLAMEAYGTATEDDSVISEAVTVGQKSVDQVDPVEQLEPV 1874
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -1
Query: 478 AHTLQVNATQQKREGKSVRVQHAAADALIHNRKQFFCDNFQPGGIVCYTIEQGTDEHGAE 299
A L+ AT +++ + R AA DA+ KQF D G + + AE
Sbjct: 2137 ARLLKTVATVEEKNQQGTRAVEAAVDAIGFEMKQFEHD-LNEGAAIPTDFRPEHLQQTAE 2195
Query: 298 YIEEHLQRVL 269
++ E +RV+
Sbjct: 2196 HVSEITKRVM 2205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,340,825
Number of Sequences: 27780
Number of extensions: 244291
Number of successful extensions: 1013
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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