Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_J12
(320 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z81542-12|CAB04422.2| 363|Caenorhabditis elegans Hypothetical p... 28 1.3
AL023821-3|CAA19439.2| 363|Caenorhabditis elegans Hypothetical ... 28 1.3
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 27 3.0
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 27 4.0
Z82052-9|CAB04825.2| 338|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z71263-4|CAA95822.1| 110|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z93388-11|CAB07660.2| 319|Caenorhabditis elegans Hypothetical p... 26 7.0
AF078787-2|AAC26950.1| 407|Caenorhabditis elegans Hypothetical ... 26 7.0
AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin... 26 7.0
Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 25 9.2
L09634-3|AAA27965.1| 168|Caenorhabditis elegans Hypothetical pr... 25 9.2
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 25 9.2
>Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical
protein T28D6.4 protein.
Length = 991
Score = 28.7 bits (61), Expect = 0.99
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 79 WGGSYRRHQRDRSDTVCTLILHASHRTRTP 168
W Y+ +R + +C L H SH T P
Sbjct: 325 WAEHYKTKRRKSAQDICELAYHLSHSTTNP 354
>Z81542-12|CAB04422.2| 363|Caenorhabditis elegans Hypothetical
protein Y102A5B.1 protein.
Length = 363
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 43 EAYIRASFVTPTWGGSYRRHQRDRSDTVCTLILHASHRTRTPAHHTCVHGFSLIGSFCYK 222
E + S PT + R + D + T T + ++ T + ++TC GF+ I + C+K
Sbjct: 63 ETELFTSSTLPTIPITSSRSRPDSTSTSTTRSVTSTIPTPSVGNYTCTDGFTYINNKCWK 122
>AL023821-3|CAA19439.2| 363|Caenorhabditis elegans Hypothetical
protein Y102A5B.1 protein.
Length = 363
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 43 EAYIRASFVTPTWGGSYRRHQRDRSDTVCTLILHASHRTRTPAHHTCVHGFSLIGSFCYK 222
E + S PT + R + D + T T + ++ T + ++TC GF+ I + C+K
Sbjct: 63 ETELFTSSTLPTIPITSSRSRPDSTSTSTTRSVTSTIPTPSVGNYTCTDGFTYINNKCWK 122
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 15 CDYTVRQL*RGIYSCVFCNSNLGRLLP 95
C T+R L RG ++ V C +LG L+P
Sbjct: 395 CYCTIRPLARGSHTYVLCFEHLGGLVP 421
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 51 YSCVFCNSNLGRLLPSSPARSQ*HCMHFNITRITSHTHSC 170
Y+ C S LG +SP RS C+ N + T ++ C
Sbjct: 112 YTGADCTSELGTACATSPCRSGATCVSSNSSATTEYSCIC 151
>Z82052-9|CAB04825.2| 338|Caenorhabditis elegans Hypothetical
protein T25E12.7 protein.
Length = 338
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 166 PAHHTCVHGFSLIGSFCYK 222
P+ +C HGF+L+ + C+K
Sbjct: 70 PSDFSCQHGFTLVNNKCWK 88
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 178 YDAQECVCDVMRVILKCIQCHCD 110
YD EC C +KC +CH D
Sbjct: 1194 YDGGECSCAETTCSVKCNKCHQD 1216
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 178 YDAQECVCDVMRVILKCIQCHCD 110
YD EC C +KC +CH D
Sbjct: 1194 YDGGECSCAETTCSVKCNKCHQD 1216
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical
protein F18C12.1 protein.
Length = 4171
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = -2
Query: 169 QECVCDVMRVILKCIQCHCDRAGDDGKSLPKLELQKTHEYMPRYNCLTV 23
+E D + +++C + CD + G P+ ++ EY Y C T+
Sbjct: 182 EERSIDELSELVECFEDTCDELWNCGTPYPQNRMKMLIEYGASYLCETI 230
>Z71263-4|CAA95822.1| 110|Caenorhabditis elegans Hypothetical
protein F52A8.1 protein.
Length = 110
Score = 26.2 bits (55), Expect = 5.3
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 160 VCDVMRVILKCIQCHC 113
VC ++ +I+ C++C C
Sbjct: 93 VCTILSIIINCVRCFC 108
>Z93388-11|CAB07660.2| 319|Caenorhabditis elegans Hypothetical
protein T10C6.3 protein.
Length = 319
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 171 ASYVRTWVLFNWILLLQKVGDQIVTI 248
+S +RT+++FNW+L L G +V +
Sbjct: 135 SSMIRTFIVFNWLLSL-VAGSYLVVV 159
>AF078787-2|AAC26950.1| 407|Caenorhabditis elegans Hypothetical
protein T17A3.3 protein.
Length = 407
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 247 IVTI*SPTFCNKRIQLKRTHVRTYDAQECVCDVMRVILKC 128
IV++ +FC +R+ LK + + E D+MR+ +C
Sbjct: 202 IVSLNYNSFCLERVALKLEDLLVSNISEMRIDIMRIGTRC 241
>AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin
protein 20 protein.
Length = 417
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 181 CVHGFSLIGSFCYK 222
C HGF+L+G+ C K
Sbjct: 23 CTHGFTLVGNKCLK 36
>Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical
protein F49A5.5b protein.
Length = 400
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 118 DTVCTLILHASHRTRTPAHHTCVHGFSLIGSFCYK 222
DT A+ T + TC GF+ +G+ C+K
Sbjct: 123 DTTSISATFATMPTPVSGNLTCASGFTYVGNKCWK 157
>Z81542-8|CAB04417.2| 402|Caenorhabditis elegans Hypothetical
protein F49A5.5a protein.
Length = 402
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 118 DTVCTLILHASHRTRTPAHHTCVHGFSLIGSFCYK 222
DT A+ T + TC GF+ +G+ C+K
Sbjct: 125 DTTSISATFATMPTPVSGNLTCASGFTYVGNKCWK 159
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
protein F54B3.1b protein.
Length = 3394
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 28 LDNYSEAYIRASFVTPTWGGSYRRHQRDRSDTVC 129
+D Y + + + WG RRH+ ++ D++C
Sbjct: 134 VDIYKRLFTFSRPILEMWGKLKRRHKHNKFDSLC 167
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
protein F54B3.1a protein.
Length = 3396
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 28 LDNYSEAYIRASFVTPTWGGSYRRHQRDRSDTVC 129
+D Y + + + WG RRH+ ++ D++C
Sbjct: 134 VDIYKRLFTFSRPILEMWGKLKRRHKHNKFDSLC 167
>L09634-3|AAA27965.1| 168|Caenorhabditis elegans Hypothetical
protein C30C11.1 protein.
Length = 168
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 152 CDACNIKVHTVSLRSRW*RR*EPPQVGVTKDARIY 48
CDAC KVH ++ + P VG +D +Y
Sbjct: 97 CDACYAKVHQLTSEIKKKMMQYNPYVGEKQDKEVY 131
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 25.4 bits (53), Expect = 9.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 130 CIQCHCDRAGDDGKSL 83
C+ C CD+AG K +
Sbjct: 422 CLPCECDKAGSQNKGI 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,551,455
Number of Sequences: 27780
Number of extensions: 150979
Number of successful extensions: 411
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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