Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_J09
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 283 3e-76
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 283 4e-76
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 283 4e-76
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 283 4e-76
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 283 4e-76
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 283 4e-76
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 281 2e-75
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 194 2e-49
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 132 1e-30
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 91 3e-18
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 32 1.2
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 32 1.2
L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein. 30 4.9
L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein. 30 4.9
L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein. 30 4.9
BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein. 30 4.9
AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein. 30 4.9
AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein. 30 4.9
U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein. 30 6.5
L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein. 30 6.5
BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein. 30 6.5
BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,... 30 6.5
AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,... 30 6.5
AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein. 30 6.5
AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein. 30 6.5
AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein. 30 6.5
AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein. 30 6.5
AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein. 30 6.5
BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein. 29 8.5
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 283 bits (694), Expect = 3e-76
Identities = 124/185 (67%), Positives = 150/185 (81%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 169
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 170 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKN 229
Query: 546 GVNPD 560
V PD
Sbjct: 230 SVTPD 234
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 283 bits (693), Expect = 4e-76
Identities = 124/185 (67%), Positives = 150/185 (81%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 169
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 170 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKN 229
Query: 546 GVNPD 560
V PD
Sbjct: 230 SVTPD 234
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 283 bits (693), Expect = 4e-76
Identities = 124/185 (67%), Positives = 150/185 (81%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 169
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 170 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKN 229
Query: 546 GVNPD 560
V PD
Sbjct: 230 SVTPD 234
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 283 bits (693), Expect = 4e-76
Identities = 124/185 (67%), Positives = 150/185 (81%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 169
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 170 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKN 229
Query: 546 GVNPD 560
V PD
Sbjct: 230 SVTPD 234
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 283 bits (693), Expect = 4e-76
Identities = 124/185 (67%), Positives = 150/185 (81%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 169
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 170 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKN 229
Query: 546 GVNPD 560
V PD
Sbjct: 230 SVTPD 234
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 283 bits (693), Expect = 4e-76
Identities = 124/185 (67%), Positives = 150/185 (81%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 57 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 116
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 117 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 176
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 177 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKN 236
Query: 546 GVNPD 560
V PD
Sbjct: 237 SVTPD 241
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 281 bits (688), Expect = 2e-75
Identities = 123/185 (66%), Positives = 149/185 (80%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXX 185
R+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
Query: 186 XXXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 365
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDG
Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDG 169
Query: 366 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGKYIEI 545
GL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +YI+
Sbjct: 170 GLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKN 229
Query: 546 GVNPD 560
V PD
Sbjct: 230 SVTPD 234
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 194 bits (473), Expect = 2e-49
Identities = 84/125 (67%), Positives = 100/125 (80%)
Frame = +3
Query: 9 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 188
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 189 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 368
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 369 LNVPH 383
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 132 bits (318), Expect = 1e-30
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = +3
Query: 315 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 494
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 495 QEDEDSFKRQFGKYIEIGVNPD 560
+EDED++K+QF +YI+ V PD
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPD 82
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 90.6 bits (215), Expect = 3e-18
Identities = 37/49 (75%), Positives = 47/49 (95%)
Frame = +3
Query: 6 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 152
R+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 50 RMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 427 NFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTL 248
N + S++ + T +PP ++P R+ + +A P H+ P PL +TL
Sbjct: 544 NRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATL 603
Query: 247 YSSP 236
+ +P
Sbjct: 604 FGTP 607
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 427 NFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTL 248
N + S++ + T +PP ++P R+ + +A P H+ P PL +TL
Sbjct: 544 NRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATL 603
Query: 247 YSSP 236
+ +P
Sbjct: 604 FGTP 607
>L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein.
Length = 126
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 94
>L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein.
Length = 131
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 94
>L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein.
Length = 864
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein.
Length = 864
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein.
Length = 677
Score = 29.9 bits (64), Expect = 6.5
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = -1
Query: 472 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 293
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 292 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 188
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein.
Length = 677
Score = 29.9 bits (64), Expect = 6.5
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = -1
Query: 472 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 293
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 292 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 188
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein.
Length = 1379
Score = 29.9 bits (64), Expect = 6.5
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -1
Query: 340 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 239
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 789 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 822
>BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 29.9 bits (64), Expect = 6.5
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = -1
Query: 472 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 293
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 292 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 188
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 29.9 bits (64), Expect = 6.5
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = -1
Query: 472 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 293
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 292 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 188
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 6.5
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -1
Query: 340 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 239
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 6.5
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -1
Query: 340 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 239
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 6.5
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -1
Query: 340 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 239
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 6.5
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -1
Query: 340 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 239
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein.
Length = 1381
Score = 29.9 bits (64), Expect = 6.5
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -1
Query: 340 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 239
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 791 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 824
>BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 29.5 bits (63), Expect = 8.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 370 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 218
+ P+++P P RAP V A+P S+ APGP GS + +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSAMGGAPPVPSRP 819
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,871,699
Number of Sequences: 237096
Number of extensions: 1902315
Number of successful extensions: 8707
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 8391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8707
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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