Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_J02
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 86 8e-17
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 86 8e-17
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 86 8e-17
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 86 8e-17
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 42 0.002
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 65/108 (60%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF +Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRRQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 189 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 244
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 245 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 289
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 86.2 bits (204), Expect = 8e-17
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = -1
Query: 590 RIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPS 411
R Q++VI TSTK+D+ + K+P HL DAYF Q +IF T+KEKY +
Sbjct: 188 RTHQKFVIATSTKIDISNVKIPKHLTDAYF----KKKKLRKPRHQEGEIFDTEKEKYEIT 243
Query: 410 EQRKADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
EQRK DQK VD ++ I+ P L+GYLR+ F L + +PH+L F
Sbjct: 244 EQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 41.5 bits (93), Expect = 0.002
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = -1
Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKL 384
K+P HL DAYF +GE IF T+KEKY +EQRK DQKL
Sbjct: 146 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKL 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,833,520
Number of Sequences: 237096
Number of extensions: 796480
Number of successful extensions: 1877
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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