Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_I24
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   5.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   7.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.5  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    20   10.0 

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 100 PGAALQATTMHNTKHNTRIFSKFTLKLSGLYL 5
           P A  +ATTM      + +F    + L  +YL
Sbjct: 229 PSAQCEATTMQENDKMSWLFESEDVLLPSVYL 260


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 125 FPFIFIRRPWCSPASYHHA 69
           FP  +I  PW +P +   A
Sbjct: 456 FPTRYIHEPWNAPLNVQRA 474


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 105 ANEDEWKLELFSGVVIEKDASGENKLNVKFEPGELREAA 221
           +NEDE +  L   VVI  D S E  L    E    R +A
Sbjct: 434 SNEDEDETPLDPVVVISNDKSTEFFLATVVEEAACRFSA 472


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -2

Query: 94  AALQATTMHNTKHNTRIFSKF 32
           + L +T  + +KHNT+ F+++
Sbjct: 378 SCLGSTETYYSKHNTQQFTQY 398


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 65  YQTQYTHFLKIYSEVIRIVPR 3
           YQT  TH  K+  ++  I+ R
Sbjct: 41  YQTLQTHMKKVREQMAGILSR 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,129
Number of Sequences: 438
Number of extensions: 1739
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)