Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_I18
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741... 41 4e-04
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696... 39 0.002
03_02_0927 - 12452262-12452428,12452538-12452607,12452689-124528... 39 0.002
03_06_0184 - 32188778-32188947,32189104-32189173,32189332-321894... 38 0.003
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331... 38 0.005
07_01_0308 + 2203597-2203774,2203886-2204066,2204141-2204282,220... 35 0.029
04_04_1534 + 34200538-34200589,34200677-34200857,34201701-342018... 34 0.050
01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207... 34 0.050
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 33 0.12
10_08_0604 + 19152363-19152731,19152773-19153514,19153926-191540... 31 0.47
11_04_0152 + 14153539-14154060 31 0.62
12_02_0217 + 15814303-15814905 30 1.1
06_03_1049 + 27173732-27173902,27175235-27175291,27176311-271763... 30 1.1
05_07_0022 - 27103367-27103533,27103783-27103852,27104074-271042... 29 1.4
02_05_0294 + 27609656-27611305 29 1.4
02_05_0106 - 25877997-25878677,25878951-25879222,25879317-25879476 29 1.4
01_06_1756 - 39676340-39676615 29 1.4
10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294... 29 1.9
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949... 28 3.3
01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664 28 4.4
12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406 27 5.8
08_01_0958 + 9532423-9533202 27 5.8
11_06_0227 + 21475954-21476771,21477215-21479144,21479292-214794... 27 7.6
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 27 7.6
04_04_0849 - 28689098-28689188,28689373-28689503,28689850-286899... 27 7.6
03_01_0347 - 2730242-2730425,2730541-2730692,2730782-2730940,273... 27 7.6
02_05_0400 + 28671562-28672219,28672365-28672441,28673679-286737... 27 7.6
01_06_0581 - 30386018-30386440 27 7.6
>05_06_0144 -
25973635-25973801,25973878-25973947,25974049-25974190,
25974647-25974827,25975248-25975443
Length = 251
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 264 DLVDSLKFGVMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVDA 416
DL L V LW + LG+C N +TL + ++ L+T+P YE ++Q+DA
Sbjct: 167 DLKKFLIVVVGLWVLSVLGSCCNFLTLFYIVFMVLYTVPVLYEKYEDQIDA 217
>01_01_0885 +
6966700-6966979,6967930-6968110,6968224-6968365,
6968448-6968517,6968617-6968783
Length = 279
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 297 LWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVDA 416
LW + LG+C N +TL+ + +V L T+P YE ++Q+D+
Sbjct: 206 LWLLSVLGSCCNFLTLVYIVFVVLHTVPILYEKYEDQIDS 245
>03_02_0927 -
12452262-12452428,12452538-12452607,12452689-12452830,
12452937-12453117,12454068-12454203
Length = 231
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 291 VMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVD 413
++LW + +G + ITL G +AL T+P Y N+EQVD
Sbjct: 156 LLLWLLSVIGNFCSSITLAYFGTIALVTIPALYSKNQEQVD 196
>03_06_0184 -
32188778-32188947,32189104-32189173,32189332-32189473,
32189559-32189739,32189857-32190051,32190782-32190795,
32190815-32190864,32191493-32191519
Length = 282
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 291 VMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVD 413
V LW +G N +T+I +G+V+ TLP YE ++QVD
Sbjct: 206 VGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVD 246
>01_06_0631 +
30732091-30732292,30732690-30732870,30732994-30733135,
30733228-30733297,30733383-30733549
Length = 253
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 297 LWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVDA 416
LW + LG+ N +TL + +VAL+T+P YE +++VDA
Sbjct: 180 LWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDA 219
>07_01_0308 +
2203597-2203774,2203886-2204066,2204141-2204282,
2204371-2204440,2204546-2204715
Length = 246
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 264 DLVDSLKFGVMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVD 413
DL + L + +G+ N +T+I +G+V TLP YE N+E+VD
Sbjct: 161 DLKNFLLVIAGFFAAAIIGSWCNLLTVIYIGFVCAHTLPVLYEKNQEKVD 210
>04_04_1534 +
34200538-34200589,34200677-34200857,34201701-34201842,
34201963-34202032,34202169-34202302
Length = 192
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 279 LKFGVMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVDANLQLARSKIN 446
+K ++LW +Y+G FN +TLI + +P YE ++QVD + +A S ++
Sbjct: 124 IKVILILWVVSYIGMLFNFLTLI-------YIVPPLYEKYQDQVDEKIGMAHSVLS 172
>01_01_0255 +
2079112-2079196,2079334-2079514,2079712-2079853,
2079934-2080003,2080140-2080303
Length = 213
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 297 LWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVDANLQLA----RSKINDISANV 464
L+ + + +CF+ +TL+ L + TLP YE + +VD + A RS + DI + V
Sbjct: 141 LFIASVIASCFSSLTLLYLVVLGTMTLPVMYENYESEVDHLVSTAVHDLRSHVGDIDSGV 200
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 255 LVEDLVDSLKFGVMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVD 413
L DL L V LW + +G+C + +TLI + + L T+P Y+ +++VD
Sbjct: 178 LGHDLKKFLGVIVALWVLSEVGSCCDFLTLIYVAVLMLHTVPILYDKYQDKVD 230
>10_08_0604 +
19152363-19152731,19152773-19153514,19153926-19154005,
19154155-19154487
Length = 507
Score = 31.1 bits (67), Expect = 0.47
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 212 LQLRCCTESLRSVVPGGGPGG-LAQVRSDAVVRHVPRRLLQRHHAHHPRLGGALHVAEG 385
+Q R C E GG P L V + + RH P +QRH LGGA HVA G
Sbjct: 300 IQTRLCGEV--EAAAGGEPCAYLRAVVMECLRRHPPVSSVQRHMVRDVMLGGA-HVARG 355
>11_04_0152 + 14153539-14154060
Length = 173
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 359 GGALHVAEGVRDEQGASGREPAARALQDQRH 451
GG + A+G R E+G++G PA R + RH
Sbjct: 14 GGGVGAADGARVEEGSTGEIPARRMERPARH 44
>12_02_0217 + 15814303-15814905
Length = 200
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 341 AHHPRLGGALHVAEGVRDEQGASGREPAARALQDQRH 451
AH GG A+ R+E+G +G PA R + RH
Sbjct: 39 AHRCDAGGGGGAADSAREEEGPTGEIPARRMERPARH 75
>06_03_1049 +
27173732-27173902,27175235-27175291,27176311-27176385,
27176481-27176621,27177144-27177542
Length = 280
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 233 ESLRSVVPGGGPGGLAQVRSDAVVRHVPRRLLQ--RHHAHHPRLGG 364
E+LR GGG GGL+ D V P +L+ HH HH GG
Sbjct: 183 ENLRVDGGGGGGGGLSDDDDDHQVT-TPNSILEDPLHHHHHQYYGG 227
>05_07_0022 -
27103367-27103533,27103783-27103852,27104074-27104215,
27104372-27104552,27104654-27104756
Length = 220
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 297 LWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVD 413
LW +G + TL+ +G++ TLP YE + +VD
Sbjct: 147 LWILAVIGETCSFTTLLYVGFLCALTLPALYERYETEVD 185
>02_05_0294 + 27609656-27611305
Length = 549
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +3
Query: 108 TMVTPSSGCWRRTLACRRSCAHVWVAVPAGGRGSIFNCAVARKACAVLFLVEDLVDSLKF 287
T V+ G R ACR + + + GG S F C V R A A +F + + +L
Sbjct: 369 TRVSNELGANRPERACRAATVGLMLGFAFGGVASAFACHV-RGAWATMFTADPAIVALTA 427
Query: 288 GVMLWCGTYLGAC 326
V+ LGAC
Sbjct: 428 SVL----PILGAC 436
>02_05_0106 - 25877997-25878677,25878951-25879222,25879317-25879476
Length = 370
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 314 PRRLLQRHHAHHPRLGGALH 373
PR+LL HH HHP AL+
Sbjct: 188 PRQLLPHHHHHHPGSSAALY 207
>01_06_1756 - 39676340-39676615
Length = 91
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 227 CTESLRSVVPGGGPGGLAQVRSDAVVR----HVPRRLLQRHHAHHPRLGGALHVAE 382
C+E +RSV P GG G V+ VV+ + R RHH +H L V E
Sbjct: 10 CSEEVRSVTPTGGFLGRGGVQQQHVVKETFQEIDRSGSGRHHHNHNHGNDYLMVRE 65
>10_08_1063 -
22628642-22628716,22628806-22629012,22629325-22629433,
22629547-22629657,22630466-22630513,22630636-22630713,
22632151-22632254,22632360-22632470,22632555-22632791
Length = 359
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 233 ESLRSVVPGGGPGGLAQVRSDAVV-RHVPRRLLQRHHAHHPRLGGALHVAEGVRDEQGAS 409
E S+ P P G A + +VV R +PR++ Q+ R+GG A G + G +
Sbjct: 256 EGTTSLQPTQAPSGNAAPGNQSVVPRPIPRQM-QQPMVGMSRMGGTNMAAFGAAPQGGIA 314
Query: 410 GREPAARALQ 439
G P +Q
Sbjct: 315 GMNPGNIPMQ 324
>02_02_0367 +
9496893-9497022,9498262-9498442,9498519-9498660,
9498757-9498826,9498920-9499089
Length = 230
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 255 LVEDLVDSLKFGVMLWCGTYLGACFNGITLIILGWVALFTLPKAYEMNKEQVD 413
L DL+ L V LW + +G+ + +TL + + L T+P Y +++VD
Sbjct: 142 LGHDLMKFLGVIVALWILSEIGSLCDFLTLFYVAVLMLHTVPILYHKYQDKVD 194
>01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664
Length = 582
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 251 VPGGGPGGLAQVRSDAVVRHVPRRLLQRHH 340
V GGG GG + +H RLLQ HH
Sbjct: 57 VGGGGSGGQEEADEQQQQQHDHHRLLQLHH 86
>12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406
Length = 351
Score = 27.5 bits (58), Expect = 5.8
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 APSRSGSTRTCSRLYKRPTMVTPSSGCWRRTLA-CRRSCAHVWVAVPAGGRGSIFNCAVA 230
A + +G++ C R K + ++ SS C RR+ A RR +AV A + A+A
Sbjct: 267 AAADAGASPGCFRRIKIWSSLSSSSSCSRRSAARWRRQGLLSQLAVDATLTQFAIDAALA 326
Query: 231 RKACAVL 251
RK+ AV+
Sbjct: 327 RKSTAVV 333
>08_01_0958 + 9532423-9533202
Length = 259
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 206 LHLQLRCCTESLRSVVPGGGPGGLAQVRSDAVVRHVPRR 322
++L ++C E + S PGGG GG A D VV + R
Sbjct: 178 VYLHVKCIREIMES--PGGGGGGGAGDEDDRVVARLLER 214
>11_06_0227 +
21475954-21476771,21477215-21479144,21479292-21479426,
21480287-21480392,21480560-21480576
Length = 1001
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = +3
Query: 141 RTLACRRSCAHVWVAVPAGGRGSIFNCAVARKACAVLFLVEDLVDSLKFGVMLWCGTYLG 320
RTL R W GG G N R A+ FL + +K + LW Y
Sbjct: 804 RTLCLRTQARFSWTV---GGAGLFPNLRFCRMDIALTFLQGAMPMLMKLQLWLWASEYCA 860
Query: 321 ACFNGI 338
A G+
Sbjct: 861 ATDVGL 866
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 123 SSGCWRRTLACRRSCAHVWVAVPAGGRGSIFNCAVARKACAV 248
SSG R +AC H+ V VP G ++ C V + A V
Sbjct: 474 SSGTRMREVACPTCTVHLQVQVPTSGSETV-ECGVCQHAFRV 514
>04_04_0849 -
28689098-28689188,28689373-28689503,28689850-28689956,
28692318-28692396,28692583-28692678,28692777-28693049,
28693139-28693285,28693381-28693723,28693784-28693995
Length = 492
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 190 GTATQTCAQLRRHANVLLQQPLE 122
GTA +C Q RR A V+L+Q LE
Sbjct: 226 GTAYYSCMQGRRRAMVVLEQVLE 248
>03_01_0347 -
2730242-2730425,2730541-2730692,2730782-2730940,
2734144-2734618,2734713-2734775,2734870-2735078
Length = 413
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 285 FGVMLWCGTYLGACFNGITLIILGW 359
FG+ WC Y G NG T+ W
Sbjct: 292 FGLKFWCIVYSGFACNGFTVFAQLW 316
>02_05_0400 +
28671562-28672219,28672365-28672441,28673679-28673730,
28673851-28674008
Length = 314
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 257 GGGPGGLAQVRSDAVVRHVPRRLLQRHHAHHP--RLGGA---LHVAEGVRDEQGASG 412
GGG GG Q + A + HH HH +LGGA LH + + + A+G
Sbjct: 65 GGGAGGFYQQAAVAPAANGHGHGHGHHHHHHQHHQLGGALQFLHRTQPIPPQDAAAG 121
>01_06_0581 - 30386018-30386440
Length = 140
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 134 LEKDISVPAELRARLGGCACRRTWLHLQLRCCTESLRSVVPGGGPGGLAQVRSD 295
+E + E AR+GG RR W L+L C T R G + SD
Sbjct: 33 IEVKVRKRVEKEARMGGGGRRRRWGWLRLPCVTFEGRGFTSKETVGEAKNIDSD 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.129 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,622,408
Number of Sequences: 37544
Number of extensions: 247816
Number of successful extensions: 1212
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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