Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_I09
         (414 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical ...    28   2.3  
AF022984-10|AAB69958.1|  358|Caenorhabditis elegans Hypothetical...    27   4.1  
AF036706-16|AAM97947.1|  139|Caenorhabditis elegans Hypothetical...    27   5.4  
Z77652-11|CAI70405.1|  310|Caenorhabditis elegans Hypothetical p...    26   9.4  
U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical pr...    26   9.4  
U20864-5|AAN65321.1|  295|Caenorhabditis elegans Aquaporin or aq...    26   9.4  
U20864-4|AAC46664.2|  304|Caenorhabditis elegans Aquaporin or aq...    26   9.4  
AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical...    26   9.4  

>U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical
           protein C05D11.7b protein.
          Length = 751

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 79  EHPKTNGTERRCSSITEI*IRQHQAPAAEPVKSANAGIRKPIRGTTNRAR 228
           + P T+  +  CS + E   +QHQ  +++P + A +  R+  +G + + R
Sbjct: 633 DEPTTSKRDACCSPVREFDDQQHQFTSSQPPQPAESSPRRFEKGRSGQRR 682


>AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical
           protein Y71G10AR.4 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +3

Query: 9   VTYQKSSNRKRRDYRPIEVSPLVRAPENEWNGATLQFYNRNINSPTPSASS 161
           +TY   S     +Y   +V+  ++ P+NE+    ++ Y  ++NS  P  ++
Sbjct: 35  LTYSPQSIHDLEEYGSTDVNVTLKFPKNEFETENIEHYALSVNSFHPETAT 85


>AF022984-10|AAB69958.1|  358|Caenorhabditis elegans Hypothetical
           protein ZK488.1 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147 PSASSRTGKICQCWNS-ETDSWDYKQSTASQEIHKLRKLELSYAEVLRNA 293
           P    R  K+ +  NS + + W+++      ++ K+ K+E S+ E+ R++
Sbjct: 306 PKYFDRLAKLMKINNSIQKNLWEHRPKMEVAKVFKIMKIEFSHPEMFRDS 355


>AF036706-16|AAM97947.1|  139|Caenorhabditis elegans Hypothetical
           protein T07A9.12b protein.
          Length = 139

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = -3

Query: 259 SFLNLCISCEAVLCL*SHESVSEFQHWQILPVLLLALGVGEFIFLL*NCNVAPFHSFSGA 80
           +   L +   A++CL  HE+VS    W   P+ +       F+F++   +   F  + G 
Sbjct: 16  TLFELWVHFAAIICLKLHETVSISYMWVASPLFVGLAFSYFFVFIIYLRSCVEFKDYRGP 75

Query: 79  LTRGLTSI 56
             R + +I
Sbjct: 76  TVRVILNI 83


>Z77652-11|CAI70405.1|  310|Caenorhabditis elegans Hypothetical
           protein C06B3.13 protein.
          Length = 310

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 149 WCWRIYISVIELQRRSVPFVFGCSHKRTDFD 57
           WC+   I+++ L    +PF  GC+   + +D
Sbjct: 121 WCYCFLIAIVLLSILLIPFFGGCADNYSFYD 151


>U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical
           protein C56E10.3 protein.
          Length = 531

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 189 NSETDSWDYKQSTASQEIHKLRKLELSYAEVLRNADKTKV 308
           N E + W  K +    +I KL+K+E +YA +     +T +
Sbjct: 444 NGEVEHWKLKVNQLQDQIEKLQKME-NYASLANGQLRTNL 482


>U20864-5|AAN65321.1|  295|Caenorhabditis elegans Aquaporin or
           aquaglyceroporin relatedprotein 1, isoform b protein.
          Length = 295

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 257 FSQFVYLL*GRALFVVPRIGFRI-PALADFTGSAAGAWCWRIYISV 123
           FS F+Y   G  +F  P   + + PA+A F G+  G W +   + +
Sbjct: 225 FSYFIY---GPGVFHSPYPNYWLAPAIAPFVGALVGGWFYHFSLGM 267


>U20864-4|AAC46664.2|  304|Caenorhabditis elegans Aquaporin or
           aquaglyceroporin relatedprotein 1, isoform a protein.
          Length = 304

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 257 FSQFVYLL*GRALFVVPRIGFRI-PALADFTGSAAGAWCWRIYISV 123
           FS F+Y   G  +F  P   + + PA+A F G+  G W +   + +
Sbjct: 234 FSYFIY---GPGVFHSPYPNYWLAPAIAPFVGALVGGWFYHFSLGM 276


>AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical
           protein C08F1.8 protein.
          Length = 600

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 147 PSASSRTGKICQCWNSETDSWDYKQS 224
           P +  +   +C+ WN ET  WDY ++
Sbjct: 567 PISGRKWSGVCR-WNVETSQWDYVET 591


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,663,760
Number of Sequences: 27780
Number of extensions: 198680
Number of successful extensions: 585
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)