Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_I03
(417 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 28 0.037
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 28 0.037
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 24 0.60
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 24 0.79
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 1.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 1.8
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 1.8
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 4.2
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 5.6
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 5.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 9.7
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 20 9.7
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 20 9.7
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 28.3 bits (60), Expect = 0.037
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 169 RGNEAPVTRRISLHNSPISTQDYNNTCRKIRGGSLEKEYMVY 294
RGN P ++R ++HN P+ + + R L+KE V+
Sbjct: 21 RGNAVPSSQRGNVHNDPLVVETTSGLVRGFPRTVLDKEVHVF 62
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 28.3 bits (60), Expect = 0.037
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 169 RGNEAPVTRRISLHNSPISTQDYNNTCRKIRGGSLEKEYMVY 294
RGN P ++R ++HN P+ + + R L+KE V+
Sbjct: 21 RGNAVPSSQRGNVHNDPLVVETTSGLVRGFPRTVLDKEVHVF 62
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 24.2 bits (50), Expect = 0.60
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 309 ITLFPIYHILFFK*TSANFTTCVVVI 232
I L IY I+F N TTC V+I
Sbjct: 41 IPLTIIYMIIFVTGIFGNITTCTVII 66
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.8 bits (49), Expect = 0.79
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 186 WSFIASVILVW 154
WSFI S IL+W
Sbjct: 396 WSFIVSTILLW 406
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 202 SLHNSPISTQDYNNTCRKI 258
++HN+ +YNN C+K+
Sbjct: 89 TIHNNNNYKYNYNNNCKKL 107
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 199 ISLHNSPISTQDYNNTC 249
IS N+ +S Y+NTC
Sbjct: 5 ISTENAKVSDSGYSNTC 21
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.6 bits (46), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 199 ISLHNSPISTQDYNNTC 249
IS N+ +S Y+NTC
Sbjct: 5 ISTENAKVSDSGYSNTC 21
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 325 VKNTKLSCFKSNGPLK 372
V +T L C+ N PLK
Sbjct: 319 VSDTALGCWNENRPLK 334
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.0 bits (42), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 161 SITEAMKLQ--SLDEYRYIIVPSRHRITTTHVVK 256
S+ A++L + EY I+ H I TH VK
Sbjct: 263 SVLHALQLYYPHVPEYSSSIIMELHNIEGTHYVK 296
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.0 bits (42), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 161 SITEAMKLQ--SLDEYRYIIVPSRHRITTTHVVK 256
S+ A++L + EY I+ H I TH VK
Sbjct: 278 SVLHALQLYYPHVPEYSSSIIMELHNIEGTHYVK 311
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 208 HNSPISTQDYNNTCRKI 258
+N+ +YNN C+K+
Sbjct: 338 YNNNNYNNNYNNNCKKL 354
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 367 KGHLI*NTIV*CFLPCLIKDYA 302
KG+L+ + C++ CL++ ++
Sbjct: 61 KGNLVNEPSITCYMYCLLEAFS 82
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 367 KGHLI*NTIV*CFLPCLIKDYA 302
KG+L+ + C++ CL++ ++
Sbjct: 61 KGNLVNEPSITCYMYCLLEAFS 82
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.311 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,330
Number of Sequences: 438
Number of extensions: 2797
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
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