Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_H24
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    27   0.18 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    26   0.24 
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    26   0.24 
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    26   0.24 
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    26   0.24 
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    26   0.24 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    25   0.41 
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    25   0.41 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   0.96 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   1.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   1.7  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   2.9  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   2.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.1  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 488 SSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           +S S+  + + NYN Y N Y T   +K  QYY
Sbjct: 86  NSLSNNYNYNNNYNNYNNNYNT--NYKKLQYY 115


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y T   +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNT--NYKKLQYY 111


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N       +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNNYNNNNYKKLQYY 113


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N       +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNNYNNNNYKKLQYY 113


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N       +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNNYNNNNYKKLQYY 113


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N       +K  QYY
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNNYNNNNYKKLQYY 113


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y     + Y   Y
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNNNYNNNYNNNY 113


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 482 IYSSFSSGDSLSPNYNEYQNQYLTTXGHKYQQYY 583
           I SS S+    S NYN Y N Y     + Y   Y
Sbjct: 81  IISSLSNNYKYS-NYNNYNNNYNNNYNNNYNNNY 113


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 457 WQLKFG*SNLLVVFFWRQL 513
           W  +FG + LL  FFWR L
Sbjct: 25  WGTQFGQAPLLERFFWRTL 43


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 395 TVLNSDTKGHYYYPSSVNIGYGSSNLASPIY 487
           T L  D   HY  P+   +G+ +  L  P++
Sbjct: 198 TPLKEDHDDHYGVPTLEELGFDTEGLLPPVW 228


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 485 YSSFSSGDSLSPNYNEYQNQY 547
           YS++++ ++   NYN Y N Y
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNY 344


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 509 SLSPNYNEYQNQYLTTXGHKYQQYY 583
           SLS NYN   N Y     + Y++ Y
Sbjct: 84  SLSNNYNYNNNNYKKLYCNNYKKLY 108


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 509 SLSPNYNEYQNQYLTTXGHKYQQYY 583
           SLS NYN   N Y     + Y++ Y
Sbjct: 84  SLSNNYNYNNNNYKKLYCNNYKKLY 108


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 509 SLSPNYNEYQNQYLTTXGHKYQQYY 583
           SLS NYN   N Y     + Y++ Y
Sbjct: 84  SLSNNYNYNNNNYKKLYCNNYRKLY 108


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 508 VSRRKRRVNWTSQI*AAISDINT*WVVVMTFCITVENGL 392
           +S   +R  W++ + AAIS++    VV+   C  V   L
Sbjct: 384 MSNNNQRTEWSATVKAAISEVQR--VVLGRLCEKVAKQL 420


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 508 VSRRKRRVNWTSQI*AAISDINT*WVVVMTFCITVENGL 392
           +S   +R  W++ + AAIS++    VV+   C  V   L
Sbjct: 422 MSNNNQRTEWSATVKAAISEVQR--VVLGRLCEKVAKQL 458


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 334 TGST*SSLTYKASTRCWA 281
           +G   S + YK++  CWA
Sbjct: 244 SGRAKSEILYKSTLHCWA 261


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 334 TGST*SSLTYKASTRCWA 281
           +G   S + YK++  CWA
Sbjct: 244 SGRAKSEILYKSTLHCWA 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,876
Number of Sequences: 438
Number of extensions: 3014
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)