Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H22
(290 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces ... 26 1.3
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 26 1.3
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 25 3.0
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 24 3.9
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 24 5.2
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 23 6.9
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 23 6.9
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 23 9.1
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 23 9.1
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 23 9.1
>SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 267
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 146 YIYYKINIPKYTYLYVPSS 202
Y++ N P YTY Y+P S
Sbjct: 204 YLFGASNPPAYTYTYIPES 222
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 1.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 65 EIQVFSSFHSVNPN--GNPAGKITEIGYLYIYYKINIPK 175
+I F SF+S+ GNP K + YLY Y + PK
Sbjct: 336 KITDFFSFYSLPSTVIGNPKYKDIQAAYLYYYASDSCPK 374
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 24.6 bits (51), Expect = 3.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 146 TSNQSLLFCPQGYRWDLRNENWKIPGFQTISIPNFIRFSQVVF 18
T QS+L P+ N++ +P +Q +PN IR +QVV+
Sbjct: 336 TQEQSILPLPE-------NKHEGLPPYQNEYVPNGIRANQVVY 371
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 24.2 bits (50), Expect = 3.9
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 212 CPYMMRVHINMYIWEYLFYNIYTSNQSLLFCPQG 111
C Y ++ + W F++ + +QS +F P G
Sbjct: 58 CKYWKKLLSDDLSWRTAFFHHFAGDQSQIFSPLG 91
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 23.8 bits (49), Expect = 5.2
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 155 NIYTSNQSLLFCPQGYRWDLRNENWKIPGFQ-TISIPNFIRFSQVVFTYTPR 3
N +++ CPQ + + I G + + S+ NFI +++ +TPR
Sbjct: 378 NELAQSEAYFDCPQWVNYFFHAGHLHIEGQKMSKSLKNFITIKEILKKFTPR 429
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 23.4 bits (48), Expect = 6.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 87 KLENTWISNYLYSKFHPIQSSSFYI 13
KL N ++ + Y+K PI+ FY+
Sbjct: 364 KLANDFMQSEDYAKSEPIEDDCFYL 388
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 23.4 bits (48), Expect = 6.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 180 HIYMYPHHIRTIKIHYYKTFVN 245
H + HH + YKTFVN
Sbjct: 206 HYFEMGHHDAAQSLRIYKTFVN 227
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 62 FEIQVFSSFHSVNPNGNPAGKITEIGYLYIYYKINIPKYTYL 187
++++ S F ++ N P G + E+G YK+ +P Y+
Sbjct: 679 YQLEASSHFSQIS-NTEPMGCLPELGLDGYGYKLFVPINEYI 719
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 23.0 bits (47), Expect = 9.1
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = -1
Query: 149 YTSNQSLLFCPQGYRWD-------LRNENWKIPGFQTISIPNFIRFSQVV 21
YTS ++ FC +G RW L +EN K+ + P I++ +V
Sbjct: 328 YTSIEAGQFCLRGDRWVPLRINLLLPDENGKLKVCDDVDNPEPIKYGSIV 377
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 48 KFHPIQSSSFYIYT 7
K HP+QSS+F YT
Sbjct: 278 KNHPVQSSNFNPYT 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,309,153
Number of Sequences: 5004
Number of extensions: 28065
Number of successful extensions: 72
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 69775820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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