Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_H22
         (290 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060980-1|AAL28528.1|  237|Drosophila melanogaster GM13219p pro...    27   5.1  
AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA...    27   5.1  
AE014297-131|AAZ52517.1|  182|Drosophila melanogaster CG33927-PA...    26   9.0  

>AY060980-1|AAL28528.1|  237|Drosophila melanogaster GM13219p
           protein.
          Length = 237

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
 Frame = -1

Query: 248 IVNKCFIIMDFNCPYM---MRVHINMYIWEYLFYNIYTSNQSLLF---CPQGYRWDLRNE 87
           I N+C + MD +CP++   +    + Y + Y+ Y        +LF       Y W    E
Sbjct: 155 ICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGE 214

Query: 86  NW 81
           NW
Sbjct: 215 NW 216


>AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA
           protein.
          Length = 381

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
 Frame = -1

Query: 248 IVNKCFIIMDFNCPYM---MRVHINMYIWEYLFYNIYTSNQSLLF---CPQGYRWDLRNE 87
           I N+C + MD +CP++   +    + Y + Y+ Y        +LF       Y W    E
Sbjct: 155 ICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGE 214

Query: 86  NW 81
           NW
Sbjct: 215 NW 216


>AE014297-131|AAZ52517.1|  182|Drosophila melanogaster CG33927-PA
           protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -1

Query: 254 ILIVN--KCFIIMDFNCPYMMRVHI 186
           I++ N  K F  ++F CPYM  VHI
Sbjct: 110 IIVFNLLKSFSNLNFTCPYMGPVHI 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,681,152
Number of Sequences: 53049
Number of extensions: 253084
Number of successful extensions: 528
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)