Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_H21
         (260 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.15 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   4.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   4.4  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    20   5.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    20   5.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    20   5.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    20   5.8  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    20   5.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   7.6  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    19   7.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.0 bits (52), Expect = 0.15
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 118 QSKFIFVKNYSFFKDYTAEAFKCNSNFVA-IYSVYTSKACNTLI 246
           ++K   V+ Y+F ++   EA + + NF++ I  V+TS A   L+
Sbjct: 511 RNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLL 554



 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 28  IVLMVGYKYLTHSDTYLNKHI 90
           IVL + Y  LTH D  + K +
Sbjct: 338 IVLNLSYNMLTHIDARMFKDL 358


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 246 NESVTGFTSIYRV 208
           N++ +G TS+YR+
Sbjct: 116 NQNCSGITSVYRI 128


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 203 PFTLYILVKPVTLSLNK 253
           PF L++ V PV+   N+
Sbjct: 615 PFQLFLYVSPVSSEYNQ 631


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 203 PFTLYILVKPVTLSLNK 253
           PF L++ V PV+   N+
Sbjct: 615 PFQLFLYVSPVSSEYNQ 631


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 100 LSTEYVYLNMYHYELNTY 47
           LS  Y Y N  +Y  N Y
Sbjct: 85  LSNNYKYSNYNNYNNNNY 102


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 100 LSTEYVYLNMYHYELNTY 47
           LS  Y Y N  +Y  N Y
Sbjct: 85  LSNNYKYSNYNNYNNNNY 102


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 100 LSTEYVYLNMYHYELNTY 47
           LS  Y Y N  +Y  N Y
Sbjct: 85  LSNNYKYSNYNNYNNNNY 102


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 100 LSTEYVYLNMYHYELNTY 47
           LS  Y Y N  +Y  N Y
Sbjct: 85  LSNNYKYSNYNNYNNNNY 102


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 91  EYVYLNMYHYELNTY 47
           +Y Y N Y+Y  N Y
Sbjct: 97  KYNYNNKYNYNNNNY 111


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 246 NESVTGFTSIYRV 208
           NE+ +G TS Y++
Sbjct: 113 NENCSGITSAYKI 125


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 107 FTSVYRICL 81
           FT+V+RIC+
Sbjct: 323 FTTVHRICI 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,267
Number of Sequences: 438
Number of extensions: 1053
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)