Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_H14
         (320 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   4.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   8.4  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              20   8.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    20   8.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    20   8.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    20   8.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.4  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 238 YVVHGKGIIYNE 273
           + +HG+GI+Y +
Sbjct: 99  FFLHGRGIVYRD 110


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 302 LTKHKLVFKDSL 267
           LTKH  VF+D L
Sbjct: 116 LTKHLQVFRDHL 127


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 267 INNTFSVYYILSVFCFCMIF 208
           +   FS+ +I S+F   +IF
Sbjct: 1   MKENFSIMFIHSIFLILIIF 20


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 258 TFSVYYILSVFCFCMIFKNNLLF 190
           T SV   +S   FC +F  +L+F
Sbjct: 199 TLSVEPKVSPMTFCRVFPFHLMF 221


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 173 NYFHRDYHNHFN 138
           NY +++Y+N++N
Sbjct: 308 NYNYKNYNNNYN 319


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 173 NYFHRDYHNHFN 138
           NY +++Y+N++N
Sbjct: 319 NYNYKNYNNNYN 330


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 267 INNTFSVYYILSVFCFCMIF 208
           +   FS+ +I S+F   +IF
Sbjct: 1   MKENFSIMFIHSIFLILIIF 20


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 258 TFSVYYILSVFCFCMIFKNNLLF 190
           T SV   +S   FC +F  +L+F
Sbjct: 199 TLSVEPKVSPMTFCRVFPFHLMF 221


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,642
Number of Sequences: 438
Number of extensions: 1436
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)