Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_H12
         (297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   2.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   2.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   2.4  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   3.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   5.6  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    20   7.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    20   7.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   7.4  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           20   7.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   7.4  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    19   9.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 135 QRNRMTLKWCYVIKTLNVTNTLK 203
           QRNR +    Y  K LNV N L+
Sbjct: 311 QRNRFSSLPYYKYKYLNVINALE 333


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 135 QRNRMTLKWCYVIKTLNVTNTLK 203
           QRNR +    Y  K LNV N L+
Sbjct: 311 QRNRFSSLPYYKYKYLNVINALE 333


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 IYI*PLKVSRKHLFQNCHKLP 272
           +Y    ++SR+HL +   K+P
Sbjct: 25  LYFIYFRISRRHLLELAEKIP 45


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 125 VNEVLLNFTLHIY 87
           V+EVL++FTL  Y
Sbjct: 50  VSEVLMDFTLDFY 62


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 54  DYY*YKVYRKNINMESKVKEDFVY*K 131
           ++Y  K ++KN+N+   V +  ++ K
Sbjct: 87  EFYLGKEWKKNLNLRDSVTKYLIHLK 112


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
          1-alpha protein.
          Length = 172

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 48 WNIEIHTYFITII 10
          W  E   Y++TII
Sbjct: 5  WKFETSKYYVTII 17


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
          1-alpha protein.
          Length = 274

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 48 WNIEIHTYFITII 10
          W  E   Y++TII
Sbjct: 21 WKFETSKYYVTII 33


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 59  IVTNGILKYIPISSQLLPR 3
           I+T+ IL Y+     ++PR
Sbjct: 789 IITHMILNYVGSEDSVIPR 807


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = +3

Query: 255 NCHKLPSVNGH 287
           NCH L    GH
Sbjct: 38  NCHSLGKAGGH 48


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 48  WNIEIHTYFITII 10
           W  E   Y++TII
Sbjct: 78  WKFETSKYYVTII 90


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 48  WNIEIHTYFITII 10
           W  E   Y++TII
Sbjct: 78  WKFETAKYYVTII 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,602
Number of Sequences: 438
Number of extensions: 1102
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)