Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H11
(562 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 0.91
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 2.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 3.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 3.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.9
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 6.4
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 6.4
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 6.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 8.5
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.2 bits (50), Expect = 0.91
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 195 ILQPLKSLVDYLSPGANKPAIVADIDARVAKGT 293
IL+ LVD PG + V D++A +A T
Sbjct: 113 ILEKKPELVDATDPGEHNGDTVTDVEAGLASRT 145
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 470 QFQFFPRQIRTVHGQQALYRVCSQL 396
Q+Q R + + HGQ+ + R C+ L
Sbjct: 372 QYQIDKRSMGSHHGQRVMVRTCNGL 396
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 213 ISEVEVSGQRSSTLARQYGGYPERY 139
I EV RSS LA + GYP Y
Sbjct: 123 IIEVNARLSRSSALASKATGYPLAY 147
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 287 FCNPSINVCYYGRF 246
+CN +IN C Y F
Sbjct: 52 YCNSAINPCIYALF 65
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 287 FCNPSINVCYYGRF 246
+CN +IN C Y F
Sbjct: 500 YCNSAINPCIYALF 513
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 216 LVDYLSPGANKPAIVADIDARVAKGT 293
LVD PG + V D++A +A T
Sbjct: 125 LVDATDPGEHNGDTVTDVEAGLASRT 150
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 6.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 237 QEINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMK 88
++IN + + G+++S Y P + RGK +EE+ E+K
Sbjct: 82 EDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIK 131
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.4 bits (43), Expect = 6.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 237 QEINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMK 88
++IN + + G+++S Y P + RGK +EE+ E+K
Sbjct: 82 EDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIK 131
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.4 bits (43), Expect = 6.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 237 QEINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMK 88
++IN + + G+++S Y P + RGK +EE+ E+K
Sbjct: 82 EDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIK 131
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 198 VSGQRSSTLARQYGGYPERYTNGRGK 121
+ G T + + G+PER RGK
Sbjct: 587 IGGSEPFTYSEKMLGFPERLILPRGK 612
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 198 VSGQRSSTLARQYGGYPERYTNGRGK 121
+ G T + + G+PER RGK
Sbjct: 587 IGGSEPFTYSEKMLGFPERLILPRGK 612
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,385
Number of Sequences: 438
Number of extensions: 3718
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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