Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H09
(526 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 157 1e-39
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 97 2e-21
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 94 1e-20
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 74 2e-14
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 72 6e-14
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 67 2e-12
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 58 1e-09
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 31 0.14
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 26 4.0
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 25 5.2
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 157 bits (380), Expect = 1e-39
Identities = 73/133 (54%), Positives = 98/133 (73%)
Frame = +1
Query: 7 GYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 186
GYDRA++VFSPDG LLQVEY QEAVR+G+TA E+K+V KLQ +K
Sbjct: 3 GYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQK 62
Query: 187 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 366
I ++D+HV +AFAGL ADARILI++A++E Q+HKL + DPV++EY+TRY+AG++QKYTQS
Sbjct: 63 IAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQS 122
Query: 367 NGRRTLLAHILVS 405
G R L++
Sbjct: 123 GGVRPFGVSTLIA 135
Score = 42.3 bits (95), Expect = 4e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3
Query: 381 PFGTYLGFDLAGIRL*MDHAHLFQTEPSGIYYEWKANATGRSAKTVRE 524
PFG + +AG + + ++QTEP+GIY WKA A GR++K RE
Sbjct: 127 PFG--VSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAARE 172
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 96.7 bits (230), Expect = 2e-21
Identities = 45/116 (38%), Positives = 68/116 (58%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
YDR + FSP+G L QVEYA EA++ GSTA EK+ + L E +V K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKL 67
Query: 190 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 357
+D H+ A +GLTADAR +I A+++ Q+H+ T ++P +E T+ I L ++
Sbjct: 68 FEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRF 123
Score = 27.9 bits (59), Expect = 0.98
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 381 PFGTYLGFDLAGIRL*MDHA-HLFQTEPSGIYYEWKANATGRSAKTVR 521
PFG L +AGI +H L+ +EPSG Y+ ++A A G ++ +
Sbjct: 137 PFGVALL--IAGID---EHGPQLYHSEPSGTYFRYEAKAIGSGSEPAK 179
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 93.9 bits (223), Expect = 1e-20
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 ARGYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKL-QEERT 177
+R YD T+FSP+G L QVEYA EA+ A EKK +KL ++E +
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 178 VRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 357
K+ + D+++ A AGLTADA ILIN A+ Q + T + + E + R + LKQ Y
Sbjct: 62 AEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY 121
Query: 358 TQSNGRRTLLAHILVSTW 411
TQ G R L + W
Sbjct: 122 TQYGGLRPFGVSFLYAGW 139
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 444 LFQTEPSGIYYEWKANATGRSAKTVR 521
LFQ+ PSG Y W+AN+ G ++ +V+
Sbjct: 147 LFQSNPSGNYGSWQANSIGGNSTSVQ 172
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 73.7 bits (173), Expect = 2e-14
Identities = 45/136 (33%), Positives = 65/136 (47%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
YD T +SP G L QVEYA EA+++GS K++ +L + +K+
Sbjct: 6 YDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ--KKL 63
Query: 190 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 369
+DDH+ +A AGL DAR+L N + E S K P+ + + +A Q TQ
Sbjct: 64 IRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEY 123
Query: 370 GRRTLLAHILVSTWQE 417
GRR LV + E
Sbjct: 124 GRRPYGVGFLVIGYDE 139
Score = 24.6 bits (51), Expect = 9.1
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 345 KTEVYPKQWPPDPFGT---YLGFDLAGIRL*MDHAHLFQTEPSGIYYEWKANATGRSAKT 515
K ++ +++ P+G +G+D +G HL + +PSG+ E+ + G +++
Sbjct: 115 KAQINTQEYGRRPYGVGFLVIGYDESG-------PHLLEFQPSGLVLEYLGTSMGSRSQS 167
Query: 516 VR 521
R
Sbjct: 168 AR 169
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 71.7 bits (168), Expect = 6e-14
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
Y ++T FSP+G L+Q+EYA AV G T+ EKK ++L ++ K+
Sbjct: 5 YAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKV 64
Query: 190 CLLDDHVVMAFAGLTADARILINRAQIECQS--HKLTVEDPVTLEYITRYIAGLKQKYTQ 363
C + + M ++G+ D R+L+++++ Q+ K+ E P T + + + IA + Q+ TQ
Sbjct: 65 CAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQESTQ 123
Query: 364 SNGRRTLLAHILVSTWQE 417
S G R +LV+ E
Sbjct: 124 SGGVRPFGVSLLVAGMDE 141
Score = 34.7 bits (76), Expect = 0.009
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 444 LFQTEPSGIYYEWKANATGRSAKTVR 521
L+Q +PSG Y+ WKA A G+S+ +
Sbjct: 146 LYQVDPSGTYFAWKATAIGKSSTAAK 171
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 66.9 bits (156), Expect = 2e-12
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 ARGYDRAITVFSPDGHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXXEKKSVAKLQEERT 177
ARG+DR ITVFSP+G L QVEYA +A G T+ +KK KL + T
Sbjct: 4 ARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDAST 63
Query: 178 VRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 357
V+ + + + G ADAR ++RA+ E + P+ + + + +A + Q
Sbjct: 64 VKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVS 123
Query: 358 TQSNGRRTL-LAHILVSTWQE 417
TQ R L +A LV+ E
Sbjct: 124 TQRAAMRPLGVAMTLVAVDDE 144
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 57.6 bits (133), Expect = 1e-09
Identities = 39/135 (28%), Positives = 58/135 (42%)
Frame = +1
Query: 7 GYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 186
GYD + FSPDG L Q EYA +AV ST EK +KL + R +
Sbjct: 7 GYDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNR 65
Query: 187 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 366
I +D H+ +A G D + ++ RA+ E S + P+ I + Q +T
Sbjct: 66 IGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCY 125
Query: 367 NGRRTLLAHILVSTW 411
+ R V+T+
Sbjct: 126 SSVRPFGVMSFVATY 140
Score = 28.7 bits (61), Expect = 0.56
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 441 HLFQTEPSGIYYEWKANATGRSAKTVR 521
HL+ EP+G+Y+ + A G+ + R
Sbjct: 146 HLYMVEPNGVYWGYNGAAAGKGRQVAR 172
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/72 (19%), Positives = 37/72 (51%)
Frame = +1
Query: 142 KKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEY 321
+ S L +TV+K+ ++ +++ AG AD + +EC+ H+L ++ +++
Sbjct: 80 RASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSA 139
Query: 322 ITRYIAGLKQKY 357
++ ++ + Y
Sbjct: 140 ASKILSNITYSY 151
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 310 TLEYITRYIAGLKQKYTQSNGRRT 381
T EYIT GL+ Q N RRT
Sbjct: 604 TAEYITNIYCGLRNDDLQGNQRRT 627
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 298 EDPVTLEYITRYIAGLKQKYTQSNGRRTLLAHI--LVSTWQEFDYEWITLISSKLNLLEF 471
++ + ++ I + A L ++ Q+ +R +L + +STW + +T + +NLL
Sbjct: 655 KEQIDMQRIPAFTAQLIKEPYQNAQKRLILLYFEGTISTWGSQYHNVMTSLQRTINLLNM 714
Query: 472 TTS 480
TS
Sbjct: 715 LTS 717
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,918,264
Number of Sequences: 5004
Number of extensions: 34401
Number of successful extensions: 101
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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