Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H09
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 176 7e-45
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 97 9e-21
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 89 2e-18
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 69 2e-12
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 67 8e-12
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80027-14|AAC48127.1| 199|Caenorhabditis elegans Hypothetical p... 29 2.0
AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical ... 28 3.6
U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical pr... 27 6.2
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 176 bits (429), Expect = 7e-45
Identities = 82/131 (62%), Positives = 105/131 (80%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
YDRAIT+FSPDGHL QVEYAQEAV+KGSTA EKKS+ LQ++RT+RKI
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 190 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 369
++DDHV++AFAGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI+RYIA KQ++TQS
Sbjct: 64 HMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSP 123
Query: 370 GRRTLLAHILV 402
GRR +L+
Sbjct: 124 GRRPFGISMLI 134
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +3
Query: 444 LFQTEPSGIYYEWKANATGRSAKTVRE 524
LF+TEPSG YYE+ ANATGR K VRE
Sbjct: 145 LFKTEPSGAYYEYVANATGRGEKPVRE 171
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 96.7 bits (230), Expect = 9e-21
Identities = 47/116 (40%), Positives = 67/116 (57%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
YDR + FSP+G L QVEYA EAV+ GST+ EK+S +KL + KI
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 190 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 357
+D H+ + FAGL AD+R L+ RAQIE Q+ T + +E +T+ +A L ++
Sbjct: 68 SKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQF 123
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 89.0 bits (211), Expect = 2e-18
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Frame = +1
Query: 1 ARGYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTV 180
AR YD T+FSP+G L QVEYA EA+ T E+K+V KL ++ +
Sbjct: 2 ARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVM 61
Query: 181 -RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 357
K+ L D++ AG+TADA ILIN + S++ + + + +E + + + KQ+Y
Sbjct: 62 TEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRY 121
Query: 358 TQSNGRRTLLAHILVSTWQE 417
TQ G+R +L W +
Sbjct: 122 TQIGGKRPFGVSLLYIGWDK 141
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 444 LFQTEPSGIYYEWKANATG 500
L+Q++PSG Y WKA G
Sbjct: 147 LYQSDPSGNYTGWKATCIG 165
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 68.9 bits (161), Expect = 2e-12
Identities = 42/136 (30%), Positives = 66/136 (48%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
YD +TV+SP G L QVEYA EA+++GS K++ L + +K+
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KKV 63
Query: 190 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 369
+D H ++ AGL +D RIL Q EC S + + V ++ + + Q TQ
Sbjct: 64 YEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYY 123
Query: 370 GRRTLLAHILVSTWQE 417
GRR IL++ + +
Sbjct: 124 GRRPFGVGILIAGYDK 139
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 66.9 bits (156), Expect = 8e-12
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +1
Query: 10 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 189
Y ++T FSP G L+Q+EYA AV+ G + E ++ V +I
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPKVEQI 64
Query: 190 CLLDDHVVMAFAGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 366
H+ ++G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+YTQS
Sbjct: 65 ---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYTQS 120
Query: 367 NGRRTLLAHILVSTWQE 417
G R A +L++ W +
Sbjct: 121 GGVRPFGASLLIAGWDK 137
Score = 33.9 bits (74), Expect = 0.072
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 444 LFQTEPSGIYYEWKANATGR---SAKTVRE 524
LFQ +PSG Y+ WKA A G+ +AKT E
Sbjct: 144 LFQCDPSGAYFAWKATALGKNDVNAKTFLE 173
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 64.1 bits (149), Expect = 6e-11
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 7 GYDRAITVFSPDGHLLQVEYAQEAVRKGS-TAXXXXXXXXXXXXXEKKSVAKLQEERTVR 183
G+DR IT+FSP+G + QVEYA +A+ + TA +K+ L TV
Sbjct: 8 GFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT 67
Query: 184 KICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQ 363
+ + V G+ DA+ I RAQ E S K + E + + +A L Q YTQ
Sbjct: 68 SVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQ 127
Query: 364 SNGRRTLLAHILVSTWQE 417
+ R+L +L ++ +
Sbjct: 128 NAEMRSLGCALLFISYDD 145
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/111 (30%), Positives = 51/111 (45%)
Frame = +1
Query: 7 GYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 186
GYD A + FSPDG + QVEYAQ+AV T +K +KL + +
Sbjct: 7 GYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPR 66
Query: 187 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIA 339
+ ++D+V +A AG D L N A E +P+ ++ I +A
Sbjct: 67 MFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVA 117
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 444 LFQTEPSGIYYEWKANATGRSAKTVR 521
LF EPSG+ YE+KA A G+ + +
Sbjct: 148 LFLVEPSGLNYEYKAWAVGKHRQAAK 173
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +1
Query: 298 EDPVTLEYITRY---IAGLKQKYTQSNGRRTL 384
++P+T E++TRY + Q +T SNGR+ +
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQAM 720
>U80027-14|AAC48127.1| 199|Caenorhabditis elegans Hypothetical
protein T28A11.19 protein.
Length = 199
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 141 EKICREVTGRENC*KDLSSR 200
E++C+ + G++NC KDL SR
Sbjct: 154 EELCKNMLGKDNCMKDLVSR 173
>AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical
protein ZK250.6 protein.
Length = 843
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +1
Query: 271 ECQSHKLTVEDPVTLEYITRYIAGLKQK----YTQSNGRRTLLAHILVSTWQEFDYEWI- 435
+C++ KLTVE TL+ ++ Y L + + + GR H +S W+E + +++
Sbjct: 620 QCETRKLTVETEFTLKLVSPYGTSLARNQVHTFVELKGRGW---HKFIS-WEELESDYVI 675
Query: 436 ---TLISSKLNLLEFT 474
T+I + + +++ T
Sbjct: 676 DDSTIIEAHVKIIKVT 691
>U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical
protein T20D4.11 protein.
Length = 199
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 141 EKICREVTGRENC*KDLSSR 200
E++C+ + G++NC KDL R
Sbjct: 154 EELCKNMLGKDNCMKDLVGR 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,668,910
Number of Sequences: 27780
Number of extensions: 193648
Number of successful extensions: 501
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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