Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_H06
         (262 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   1.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   1.9  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   1.9  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   2.5  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   2.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   5.8  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    20   5.8  
M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    19   7.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   7.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   7.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 31   KDVSKQDMDPELDDLLDSALQDM 99
            KDV   D     +D+LD+A +D+
Sbjct: 1409 KDVKLSDFGFSTEDILDTADEDL 1431



 Score = 20.2 bits (40), Expect = 4.4
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = +1

Query: 19  MSDNKDVSKQDMDPELDDLLDSALQDMTKKEQKSESQEVNATEAPQNMWSDEFI 180
           +S +++  KQD+     D+  S+    + +E      +    +APQN     F+
Sbjct: 353 LSSSEEKLKQDILNLRTDISSSSSSISSSEENDFWQPKPTLEDAPQNSLLPNFV 406


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 32  KMYRNKTWTRNWTIYW 79
           KM +  T+T N+++YW
Sbjct: 252 KMAKAFTYTYNYSMYW 267


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
          protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 55 PCLVSIHLCYQT 20
          P LV +H C+QT
Sbjct: 45 PFLVQLHSCFQT 56


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -1

Query: 169 HSTCSVELLLHLPLGIHSFVPFLSCLEVHCPIDRPIPGPCLVSI 38
           ++TC ++LL     G   F   +  LE+  P +  + G  +V++
Sbjct: 68  YTTCIMKLLRTFKNGNFDFDMIVKQLEITMPPEEVVIGKEIVAV 111


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 171 ITPHVLWSFCCIYLLGFTLLFLFC 100
           +TP  L  F C+ L G   LF  C
Sbjct: 18  LTPSTLGRFPCLLLNGKXDLFARC 41


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 254 CSSGTPLKRP 225
           C SG P++RP
Sbjct: 326 CISGAPIERP 335


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 238 HLNGQG*RPYC 206
           HLN +G + YC
Sbjct: 57  HLNAEGMKKYC 67


>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 97  MTKKEQKSESQEVNATEAPQNMW 165
           +T++ ++  S+++  TEA   +W
Sbjct: 45  LTERRRQQLSRDLGLTEAQIKIW 67


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 113 KRVNPKR*MQQKLHRTCGV 169
           K + P      K+H TCGV
Sbjct: 313 KYITPLIQKHLKIHDTCGV 331


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 79  PIDRPIPGPC 50
           P  RP+ GPC
Sbjct: 884 PSPRPLVGPC 893


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.127    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,524
Number of Sequences: 438
Number of extensions: 1830
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)