Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H04
(529 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 55 5e-08
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 55 5e-08
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 55 5e-08
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 55 5e-08
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 55 5e-08
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 55 5e-08
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 55 5e-08
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 55 5e-08
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 55 5e-08
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 55 5e-08
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 50 3e-06
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 50 3e-06
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 47 2e-05
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 47 2e-05
AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p pro... 39 0.005
BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p pro... 34 0.10
AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p pro... 34 0.10
AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA... 34 0.10
Y17922-1|CAA76942.1| 1724|Drosophila melanogaster UNC-13-B prote... 31 1.3
Y17921-1|CAA76941.1| 1304|Drosophila melanogaster UNC-13 protein... 31 1.3
AY069559-1|AAL39704.1| 1508|Drosophila melanogaster LD28927p pro... 31 1.3
AF169141-1|AAF22962.1| 1752|Drosophila melanogaster UNC-13 protein. 31 1.3
AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,... 31 1.3
AE014135-149|AAF59405.4| 2874|Drosophila melanogaster CG2999-PC,... 31 1.3
AE014135-148|AAN06592.1| 2871|Drosophila melanogaster CG2999-PA,... 31 1.3
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 28 9.0
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 480 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 480 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 624 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 480 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 624 SNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 498 SNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 11 SKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
S GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 498 SNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 23 GTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
GT+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 589 GTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 23 GTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
GT+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 589 GTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p
protein.
Length = 703
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 20 KGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 133
+GTS +FFT + AK+L+ +LQEA Q + +L +MA
Sbjct: 626 QGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMA 663
>BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p
protein.
Length = 1224
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 20 KGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 130
KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 854 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p
protein.
Length = 680
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 20 KGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 130
KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 310 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 346
>AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA
protein.
Length = 1224
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 20 KGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 130
KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 854 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>Y17922-1|CAA76942.1| 1724|Drosophila melanogaster UNC-13-B protein
protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 1035 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 1066
>Y17921-1|CAA76941.1| 1304|Drosophila melanogaster UNC-13 protein
protein.
Length = 1304
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 615 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 646
>AY069559-1|AAL39704.1| 1508|Drosophila melanogaster LD28927p
protein.
Length = 1508
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 793 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 824
>AF169141-1|AAF22962.1| 1752|Drosophila melanogaster UNC-13 protein.
Length = 1752
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 1035 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 1066
>AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,
isoform B protein.
Length = 3183
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 2468 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 2499
>AE014135-149|AAF59405.4| 2874|Drosophila melanogaster CG2999-PC,
isoform C protein.
Length = 2874
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 2159 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 2190
>AE014135-148|AAN06592.1| 2871|Drosophila melanogaster CG2999-PA,
isoform A protein.
Length = 2871
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 313 SNPRMSTCVKYLVNICSCG*FNLLFDDCSEIY 408
S PR ST VK V C + LF++C E+Y
Sbjct: 2156 SPPRASTVVKDCVKACLRSTYQFLFENCYELY 2187
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 335 QVLIRGLLLTVKIHTIKFKLDINSHQIFDVHHLLCRN 225
+V ++GL + H IK +L+ H++ D+H L RN
Sbjct: 200 RVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLRRN 236
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,187,873
Number of Sequences: 53049
Number of extensions: 299737
Number of successful extensions: 717
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -