Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H02
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 286 8e-78
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 286 8e-78
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 285 2e-77
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 282 1e-76
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 282 1e-76
03_01_0034 + 318432-318825,318902-319851 280 5e-76
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 261 2e-70
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 260 6e-70
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 157 5e-39
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 157 6e-39
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 155 1e-38
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 134 4e-32
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 113 8e-26
09_04_0325 + 16689613-16689772,16690043-16690329 30 0.93
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285... 28 5.0
03_01_0524 + 3943581-3943610,3943889-3944050,3944403-3944637,394... 28 5.0
01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605 28 5.0
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 27 6.5
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 8.7
04_04_1351 - 32827136-32827984 27 8.7
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 27 8.7
02_05_0971 - 33188816-33188965,33190406-33190705,33191500-331915... 27 8.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 286 bits (701), Expect = 8e-78
Identities = 133/168 (79%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
DVVRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
TVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDL
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDL 225
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 286 bits (701), Expect = 8e-78
Identities = 133/168 (79%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
DVVRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
TVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDL
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDL 225
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 285 bits (698), Expect = 2e-77
Identities = 132/168 (78%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
DVVRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
TVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDL
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDL 225
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 282 bits (691), Expect = 1e-76
Identities = 130/168 (77%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 238 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 297
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
DVVRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSD
Sbjct: 298 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 357
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
TVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL
Sbjct: 358 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 405
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 282 bits (691), Expect = 1e-76
Identities = 130/168 (77%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
DVVRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
TVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 280 bits (686), Expect = 5e-76
Identities = 129/168 (76%), Positives = 141/168 (83%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVRSGP+G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VL
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
DVVRKEAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
TVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDL
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 261 bits (640), Expect = 2e-70
Identities = 130/189 (68%), Positives = 142/189 (75%), Gaps = 21/189 (11%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 184 DVVRKEAESCDCLQ---------------------GFQXXXXXXXXXXXXXXXXXXXKIR 300
DVVRKEAE+CDCLQ GFQ KIR
Sbjct: 118 DVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLISKIR 177
Query: 301 EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLK 480
EEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLK
Sbjct: 178 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 237
Query: 481 LSTPTYGDL 507
L+TP++GDL
Sbjct: 238 LTTPSFGDL 246
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 260 bits (636), Expect = 6e-70
Identities = 128/184 (69%), Positives = 139/184 (75%), Gaps = 16/184 (8%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA+L+DLEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 184 DVVRKEAESCDCLQ----------------GFQXXXXXXXXXXXXXXXXXXXKIREEYPD 315
DVVRKEAE+CDCLQ GFQ KIREEYPD
Sbjct: 118 DVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPD 177
Query: 316 RIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPT 495
R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ P+
Sbjct: 178 RMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS 237
Query: 496 YGDL 507
+GDL
Sbjct: 238 FGDL 241
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 157 bits (381), Expect = 5e-39
Identities = 74/166 (44%), Positives = 102/166 (61%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRAI VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDR 121
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VRK A++C LQGF ++ +Y + +++ PSP+VS V
Sbjct: 122 VRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAV 181
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L
Sbjct: 182 VEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 157 bits (380), Expect = 6e-39
Identities = 73/166 (43%), Positives = 103/166 (62%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDR 121
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+RK A++C LQGF ++ +Y + ++V PSP+VS +V
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L
Sbjct: 182 VEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 155 bits (377), Expect = 1e-38
Identities = 73/166 (43%), Positives = 103/166 (62%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDR 121
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+RK A++C LQGF ++ +Y + ++V PSP+VS +V
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L
Sbjct: 182 VEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 134 bits (324), Expect = 4e-32
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 21/187 (11%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+ VDLEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E+VD LD
Sbjct: 122 VPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDR 181
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP------ 351
+RK A++C LQGF ++ +Y + +++ PSP
Sbjct: 182 LRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMS 241
Query: 352 ---------------KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLS 486
K+S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L +
Sbjct: 242 SSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIE 301
Query: 487 TPTYGDL 507
PTY +L
Sbjct: 302 RPTYTNL 308
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 113 bits (272), Expect = 8e-26
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 183
+PRA+LVDLEP ++ +++ + ++ +N + GAGNNWA G Y +G ++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIM 119
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVS 360
D++ +EA+ D L+GF + + Y +++ TYSV P+ + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 361 DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTY 498
D VV+PYN+ L++ +L N D +DN AL I L L+ PT+
Sbjct: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTF 225
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 0.93
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +1
Query: 85 FRPDNFVFGQSGAGN-NWA 138
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>08_01_0319 +
2848751-2848762,2849516-2850449,2850476-2851234,
2851793-2851850,2851900-2852179
Length = 680
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 502 RHMWVWIVSACGSRCHRGLHCQYNKFHLCFLLTDVPKVWH 383
RH W+ ++ C +C +GL QY +LC + TD+ + H
Sbjct: 249 RHAWLISIAGC-LQC-KGLLDQYWCMNLCDMSTDITNLVH 286
>03_01_0524 +
3943581-3943610,3943889-3944050,3944403-3944637,
3945626-3945666,3946101-3946145,3947119-3947246,
3947446-3947554,3947641-3947694
Length = 267
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 61 RSGPFGQIFRPDNFVFGQSGAGNNWAKGH 147
++ P+ + +++ +G SGAGN ++ GH
Sbjct: 64 QANPYWAMMHTNSYKYGYSGAGNYYSYGH 92
>01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605
Length = 821
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -3
Query: 487 WIVSACGSRCHRGLHCQYNKFHLCFLLTDVPKVWHC 380
W V +RC L C++++ H F ++W C
Sbjct: 452 WNVETLRARCLNDLECEWSELHGLFRELRFVEMWRC 487
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 173 STSSAPSV*C-PLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSR--STRMAR 15
STS+AP+ P AQ PA K R PK P+ E+ PG R S+ +AR
Sbjct: 1712 STSAAPAAPSEPKAQPEPAEPKVKETEPSRTPEPKAPKTEEASQPGGRIFSSPLAR 1767
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 161 APSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMV-PGSRSTRMARGTP 6
+PS A L P P+ +TK S + I P+ R S G R+ + GTP
Sbjct: 59 SPSPSSTRAGLPPRPNSTRTKSSLKSIIPQQSFRARSSAQEGDRAILLVPGTP 111
>04_04_1351 - 32827136-32827984
Length = 282
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 125 PAPDCPKTKLSGRKICPKGPERTESM-VPGSRST 27
P+P PK + GRK CP P T S P S T
Sbjct: 170 PSPSPPK-RHGGRKACPPSPTPTPSTPTPSSSDT 202
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 303 RIPRQNHEHILCCTFT*SVRHCC 371
RIP Q+ H + CT SVR+CC
Sbjct: 43 RIPAQS-PHDMSCTMCGSVRYCC 64
>02_05_0971 -
33188816-33188965,33190406-33190705,33191500-33191562,
33191637-33191710,33191880-33191973,33193396-33193482,
33193753-33193887
Length = 300
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -2
Query: 227 PCKQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG-PERTES 51
P K H A +T + + S S +PS P+A +P C G G P R
Sbjct: 179 PSKCYHTQAQSQTRTSSTSPSMSPSPPPPVATEAESPSCNGINKRGSSAMDSGKPPRASE 238
Query: 50 MVPGSRSTRMARG 12
+ G + G
Sbjct: 239 VGSGQSQSGFCFG 251
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,920,449
Number of Sequences: 37544
Number of extensions: 293716
Number of successful extensions: 933
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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